[Pomp-commits] r1243 - pkg/pomp/data pkg/pomp/inst pkg/pomp/man www/content www/vignettes
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Thu Jul 2 14:29:27 CEST 2015
Author: kingaa
Date: 2015-07-02 14:29:27 +0200 (Thu, 02 Jul 2015)
New Revision: 1243
Added:
pkg/pomp/data/ewcitmeas.rda
Modified:
pkg/pomp/inst/NEWS.Rd
pkg/pomp/man/measles.Rd
www/content/NEWS.html
www/vignettes/pomp.pdf
Log:
- add 'ewcitmeas' dataset
Added: pkg/pomp/data/ewcitmeas.rda
===================================================================
--- pkg/pomp/data/ewcitmeas.rda (rev 0)
+++ pkg/pomp/data/ewcitmeas.rda 2015-07-02 12:29:27 UTC (rev 1243)
@@ -0,0 +1,129 @@
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\ No newline at end of file
Modified: pkg/pomp/inst/NEWS.Rd
===================================================================
--- pkg/pomp/inst/NEWS.Rd 2015-07-02 01:18:46 UTC (rev 1242)
+++ pkg/pomp/inst/NEWS.Rd 2015-07-02 12:29:27 UTC (rev 1243)
@@ -1,5 +1,10 @@
\name{NEWS}
\title{News for package `pomp'}
+\section{Changes in \pkg{pomp} version 0.69-2}{
+ \itemize{
+ \item Measles data from England and Wales, kindly provided by Ben Bolker, are now included as \code{ewmeas} and \code{ewcitmeas}.
+ }
+}
\section{Changes in \pkg{pomp} version 0.68-2}{
\itemize{
\item When using \code{Csnippet}s, by default, the C codes and shared-object files are stored in the R session's temporary directory.
Modified: pkg/pomp/man/measles.Rd
===================================================================
--- pkg/pomp/man/measles.Rd 2015-07-02 01:18:46 UTC (rev 1242)
+++ pkg/pomp/man/measles.Rd 2015-07-02 12:29:27 UTC (rev 1243)
@@ -1,19 +1,23 @@
\name{Childhood disease incidence data}
\alias{LondonYorke}
\alias{ewmeas}
+\alias{ewcitmeas}
\docType{data}
\title{Historical childhood disease incidence data}
\description{
- \code{LondonYorke} is a data-frame containing the monthly number of reported cases of chickenpox, measles, and mumps from two American cities (Baltimore and New York) in the mid-20th century (1928--1972).
+ \code{LondonYorke} is a data frame containing the monthly number of reported cases of chickenpox, measles, and mumps from two American cities (Baltimore and New York) in the mid-20th century (1928--1972).
- \code{ewmeas} is a data-frame containing weekly reported cases of measles in England and Wales 1948--1966.
+ \code{ewmeas} and \code{ewcitmeas} are data frames containing weekly reported cases of measles in England and Wales.
+ \code{ewmeas} records the total measles reports for the whole country, 1948--1966.
+ One questionable data point has been replaced with an NA.
+ \code{ewcitmeas} records the incidence in seven English cities 1948--1987.
These data were kindly provided by Ben Bolker, who writes:
\dQuote{Most of these data have been manually entered from published records by various people, and are prone to errors at several levels. All data are provided as is; use at your own risk.}
- One questionable data point has been replaced with an NA.
}
\usage{
LondonYorke
ewmeas
+ewcitmeas
}
\examples{
plot(cases~time,data=LondonYorke,subset=disease=="measles",type='n',main="measles",bty='l')
@@ -38,6 +42,8 @@
)
plot(reports~time,data=ewmeas,type='l')
+
+plot(reports~date,data=ewcitmeas,subset=city=="Liverpool",type='l')
}
\references{
W. P. London and J. A. Yorke,
Modified: www/content/NEWS.html
===================================================================
--- www/content/NEWS.html 2015-07-02 01:18:46 UTC (rev 1242)
+++ www/content/NEWS.html 2015-07-02 12:29:27 UTC (rev 1243)
@@ -7,6 +7,16 @@
<h2>News for package ‘pomp’</h2>
+<h3>Changes in <span class="pkg">pomp</span> version 0.69-2</h3>
+
+
+<ul>
+<li><p> Measles data from England and Wales, kindly provided by Ben Bolker, are now included as <code>ewmeas</code> and <code>ewcitmeas</code>.
+</p>
+</li></ul>
+
+
+
<h3>Changes in <span class="pkg">pomp</span> version 0.68-2</h3>
Modified: www/vignettes/pomp.pdf
===================================================================
--- www/vignettes/pomp.pdf 2015-07-02 01:18:46 UTC (rev 1242)
+++ www/vignettes/pomp.pdf 2015-07-02 12:29:27 UTC (rev 1243)
@@ -1,43 +1,58 @@
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[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/pomp -r 1243
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