[Picante-commits] r204 - branches/will/man

[noreply at r-forge.r-project.org]

Author: will_cornwell
Date: 2009-11-19 02:04:13 +0100 (Thu, 19 Nov 2009)
New Revision: 204

Modified:
   branches/will/man/evol.distinct.Rd
   branches/will/man/tax.distinctiveness.Rd
Log:
fixed bug in doc

Modified: branches/will/man/evol.distinct.Rd
===================================================================
--- branches/will/man/evol.distinct.Rd	2009-11-19 00:59:55 UTC (rev 203)
+++ branches/will/man/evol.distinct.Rd	2009-11-19 01:04:13 UTC (rev 204)
@@ -2,6 +2,7 @@
 \Rdversion{1.1}
 \alias{evol.distinct}
 %- Also NEED an '\alias' for EACH other topic documented here.
+
 \title{
 Species' evolutionary distinctiveness
 }
@@ -19,7 +20,7 @@
 a) equal splits (Redding and Mooers 2006) or b) fair proportions (Isaac et al., 2007)
 }
   \item{scale}{
-%%     The scale option refers to whether or not the phylogeny should be scaled to a depth of 1 or, in the case of an ultrametric tree,  scaled such that branch lengths are relative.
+The scale option refers to whether or not the phylogeny should be scaled to a depth of 1 or, in the case of an ultrametric tree,  scaled such that branch lengths are relative.
 }
   \item{use.branch.lengths}{
 If use.branch.lengths=FALSE, then all branch lengths are changed to 1.
@@ -34,7 +35,7 @@
 the EDGE: conservation priorities based on threat and phylogeny. PLoS ONE, 2, e296.
 
 Mark Vellend, William K. Cornwell, Karen Magnuson-Ford, and Arne ¯. Mooers. Measuring phylogenetic biodiversity
-In: Biological diversity: frontiers in measurement and assessment.  Edited by Anne Magurran & Brian McGill. in press
+In: Biological diversity: frontiers in measurement and assessment.  Edited by Anne Magurran and Brian McGill. in press
 }
 
 \author{

Modified: branches/will/man/tax.distinctiveness.Rd
===================================================================
--- branches/will/man/tax.distinctiveness.Rd	2009-11-19 00:59:55 UTC (rev 203)
+++ branches/will/man/tax.distinctiveness.Rd	2009-11-19 01:04:13 UTC (rev 204)
@@ -3,7 +3,7 @@
 \alias{tax.distinctiveness}
 %- Also NEED an '\alias' for EACH other topic documented here.
 \title{
-%%  ~~function to do ... ~~
+Taxonomic distinctiveness sensu Vane-Wright or May
 }
 \description{
 Taxic diversity: Vane-Wright et al., 1991 and May 1990 which accounts for polytomies by counting the number of branches descending from each node that lies on the path from a spp tip to the root (not just counting the number of nodes).
@@ -19,6 +19,7 @@
   \item{type}{
 specify "Vane-Wright" or "May"
 }
+}
 
 
 \references{