[Phylobase-devl] adephylo/phylobase issue

Jombart, Thibaut t.jombart at imperial.ac.uk
Mon Nov 7 10:55:37 CET 2011

Hi Ben, 

hmm... that's odd, I need to check if there's a typo in my email address. I only received an automatic email warning me of an issue with windows binaries in the devel version of R, and replied I'd fix this within a couple of weeks.

I'll fix this today. Sorry that the problem bounced back at you. 

How are you anyway?

All the best


From: Ben Bolker [bbolker at gmail.com]
Sent: 04 November 2011 23:10
To: Jombart, Thibaut
Cc: phylobase-devl at lists.r-forge.r-project.org
Subject: adephylo/phylobase issue

  Hi Thibaut,

  Brian Ripley wrote to me (as phylobase package maintainer) and said
that there was a problem with adephylo with R version 2.14, that they
hadn't been able to reach you, and that they were therefore taking
adephylo off the current CRAN list (archiving it) and wanted me to take
it out of the phylobase materials.

  There's a fairly simple fix to the problem (not passing checks), it
seems, which is adding an explicit "phylobase::" reference before the
edges() call in table.phylo4d .  In the longer run, there might be a
better way to mediate the conflict between ape and phylobase here ...

  Can you fix this?

    Ben Bolker

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