[Phylobase-devl] New phylobase build approach using static libncl (Was: Rcpp and OS X compiliation)
bolker at ufl.edu
Sat Feb 27 20:08:47 CET 2010
fine with me, phylobase passes R CMD check on my system without it.
We can always restore it from SVN if it breaks something, right?
Dirk Eddelbuettel wrote:
> Hi phylobase'ers,
> On 8 February 2010 at 17:54, Dirk Eddelbuettel wrote:
> | On 8 February 2010 at 15:40, Peter Cowan wrote:
> | | It appears to be building fine with Mac OS X (i386 & x86_64). I agreed the
> | | commingled approach is the way to go. I think this will suit the needs of
> | | our users best. In fact, I tried it months ago but didn't have success, so I
> | | thank you for your efforts!
> | Cool! I didn't know that, so thanks for the thumbs up!
> | | From my understanding, we don't need all of the source files for our NCL commands.
> | Correct! But I wanted to be careful here. But in fact I think now that move
> | the old
> | src/ncl/
> | into
> | src/ncl.original/
> | and moved the files we need out of it, we can in fact clean up via, say,
> | $ svn rm pkg/src/ncl.original
> | $ svn ci pkg -m'remove unused parts of ncl library'
> | but I think I should leave that to one of the actual phylobase maintainers.
> I think we can do
> $ svn rm pkg/src/ncl.original
> to clean up a little more. Comments, anyone?
> | | Down the road, we might be able to clean things up a little. For example
> | | the nxsdistancedatum.cpp file is empty
> | Hadn't noticed.
> | | and nxsemptyblock.cpp appears not to be used either.
> | That one actually blocks building which is why I #ifdef'ed it out.
> | Oh, the sweet sound of progress :)
> | Dirk
> | --
> | Registration is open for the 2nd International conference R / Finance 2010
> | See http://www.RinFinance.com for details, and see you in Chicago in April!
Associate professor, Biology Dep't, Univ. of Florida
bolker at ufl.edu / people.biology.ufl.edu/bolker
GPG key: people.biology.ufl.edu/bolker/benbolker-publickey.asc
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