[Phylobase-devl] Aug. virtual hackathon
Steven Kembel
steve.kembel at gmail.com
Sun Aug 2 19:44:15 CEST 2009
Hi everyone,
thanks to all for getting the ball rolling again and for the recent
work on the package. I could participate in a mini-hackathon in the
next month (August 10 onwards). I will need to re-familiarize myself
before I can guess what and how much needs to be done but agree that
getting a stable package onto CRAN would be awesome.
Cheers,
Steve
On Aug 2, 2009, at 10:31 AM, Jombart, Thibaut wrote:
> Congratulations Brian for your new position!
>
> I'll be off and far from a computer from 4th to 25th August, so I
> could help to hack our way onto CRAN starting from the 26th. I'm
> very pleased to think we're getting close to a first release on
> CRAN. I think a stable release is essential to allow the existence
> of other packages which would depend on phylobase for data
> representation/handling, which was one of the original aim of the
> package. Actually, I have a young adephylo package, which will
> ultimately (and hopefully soon) replace all phylogenetic functions
> in ade4, and uses phylo4/phylo4d classes, that desperately waits for
> a stable phylobase to become a grown-up package.
>
> Thanks for making things move forward again.
>
> Best,
>
> Thibaut.
>
>
>
> ________________________________________
> From: phylobase-devl-bounces at lists.r-forge.r-project.org [phylobase-devl-bounces at lists.r-forge.r-project.org
> ] On Behalf Of Brian O'Meara [omeara.brian at gmail.com]
> Sent: 02 August 2009 02:46
> To: Ben Bolker
> Cc: Phylobase Devs
> Subject: Re: [Phylobase-devl] Aug. virtual hackathon
>
> I'm starting a new job this week (prof at U Tenn Knoxville) and so
> won't be able to devote much time to a hackathon this month. I do
> think a hackathon to get it on CRAN is a good idea, for what that's
> worth.
>
> Brian
>
> On Aug 1, 2009, at 3:52 PM, Ben Bolker wrote:
>
>> I'm at ESA this week.
>>
>> Classes start Aug 24 here.
>>
>> I'm game pretty much any day 10-21 Aug, although Thursday afternoons
>> are not so great.
>>
>> Also, be aware that François has been working on a branch (hopefully
>> not a fork) -- he decided that it would be better to just bite the
>> bullet and maintain persistent internal node IDs (I think that's a
>> fair
>> representation). We should hear what he has to say about it, and
>> decide
>> whether to merge his branch and start from there.
>>
>> Thanks for pushing the ball forward ...
>>
>> Ben
>>
>>
>> Peter Cowan wrote:
>>> phylobase devs,
>>>
>>> Last December, we had a very successful virtual hackathon. However,
>>> development has stalled since then. Would folks be interested/
>>> willing
>>> to participate in a hackathon in the next month, focused on
>>> preparing
>>> the package for a release to CRAN? The school year is looming so I
>>> suspect for many the sooner the better, though ESA is this week,
>>> which
>>> will keep at least Steve occupied.
>>>
>>> * If you are able, what are the best days for you?
>>>
>>> * What needs to be done before we can submit the package to CRAN?
>>> How
>>> long do you expect they will take?
>>>
>>>
>>> Personally I'm free anytime. I need to finish up some changes I've
>>> started with the plotting functions, I suspect it will take me a day
>>> or two wrap them up.
>>>
>>> Peter
>>> _______________________________________________
>>> Phylobase-devl mailing list
>>> Phylobase-devl at lists.r-forge.r-project.org
>>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/phylobase-devl
>>
>>
>> --
>> Ben Bolker
>> Associate professor, Biology Dep't, Univ. of Florida
>> bolker at ufl.edu / www.zoology.ufl.edu/bolker
>> GPG key: www.zoology.ufl.edu/bolker/benbolker-publickey.asc
>>
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>
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