[Phylobase-devl] [phylobase-Bugs][416] Coerce method from phylo to phylo4 is broken

[phylobase-bugs at r-forge.r-project.org]

Bugs item #416, was opened at 2009-04-21 11:18
Status: Open
Priority: 3
Submitted By: François Michonneau (francois)
Assigned to: François Michonneau (francois)
Summary: Coerce method from phylo to phylo4 is broken 
Component: None
>Resolution: Invalid
Severity: None
Version: None
Operating System: None
URL: 


Initial Comment:


Example:
> as(tree.owls[[1]], "phylo4")
          label node ancestr edge.length node.type
5     Tyto_alba    5      NA        13.5      root
6 Athene_noctua    6       5         7.3  internal
7     Asio_otus    7       6         4.2  internal
1          owls    1       7          NA       tip
2   Strix_aluco    2       7         4.2       tip
3                  3       6         3.1       tip
4                  4       5         6.3       tip

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>Comment By: François Michonneau (francois)
Date: 2009-04-22 09:20

Message:
Coerce method works well. The problem comes from a typo in the examples of 'read.tree' from 'ape'. I sent a message to E. Paradis.


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