[Phylobase-devl] Planning the next release of phylobase
Ben Bolker
bolker at zoo.ufl.edu
Fri Feb 22 19:25:25 CET 2008
Peter, thanks for getting things moving again ...
Peter Cowan wrote:
> Hi all,
>
> Our 0.3 release has been out in the wild for a little while now. We
> should begin planning for the next release of phylobase. Right now
> the TODO file is a bit big and sprawling. First we should clear out
> the completed items. Then add features to be implemented next.
>
> To get the ball rolling, here is what I would like to see in the next
> version.
>
> 1. A working example in the vignette of a function. I'm willing to do
> this and was considering a brownian trait simulator (because there
> appears to be a shortage).
>
> 2. Automagical subsetting of phylo4d objects.
OK, what do you mean by this?
>
> 3. A final decision on how nodes will be referred to by other commands.
>
> What does everyone think the best way to track and discuss these
> issues? Via the mailing list? A chat-room or telephone conference?
> Or by the R-forge issue tracker? Personally I'm interested in giving
> the tracker a try, it would allow us to claim tasks and have
> conversation about particular features/bugs. What do other people
> think?
Tracker is fine with me for now.
I could chat or phone next week if people want ...
Another random question/opinion poll: what do people think about
the names of the tree-walking functions? should it be
getAncestors, getDescendants? Sons, Daughters? Leaves, branches?
Ben
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