[Phylobase-commits] r296 - pkg/man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Nov 21 15:35:39 CET 2008
Author: jombart
Date: 2008-11-21 15:35:39 +0100 (Fri, 21 Nov 2008)
New Revision: 296
Modified:
pkg/man/treewalk.Rd
Log:
Small add to the doc of getedges.
Modified: pkg/man/treewalk.Rd
===================================================================
--- pkg/man/treewalk.Rd 2008-11-21 14:24:12 UTC (rev 295)
+++ pkg/man/treewalk.Rd 2008-11-21 14:35:39 UTC (rev 296)
@@ -78,12 +78,15 @@
ancestors(geospiza,"N11")
MRCA(geospiza,"conirostris","difficilis","fuliginosa")
MRCA(geospiza,"olivacea","conirostris")
+
## shortest path between 2 nodes
shortestPath(geospiza, "fortis","fuliginosa")
shortestPath(geospiza, "N02","N05")
+
## identifying an edge fron its terminal node
getedges(geospiza,c("olivacea","N02","fortis"))
getnodes(geospiza, c("olivacea","N02","fortis"))
geospiza$edge[c(26,1,11),]
+ if(require(ape)){ edgelabels() }
}
\keyword{misc}
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