[Phylobase-commits] r197 - branches/pdcgsoc/misc
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Wed Jul 9 10:13:54 CEST 2008
Author: pdc
Date: 2008-07-09 10:13:54 +0200 (Wed, 09 Jul 2008)
New Revision: 197
Modified:
branches/pdcgsoc/misc/temp.R
Log:
silly bug fixes
Modified: branches/pdcgsoc/misc/temp.R
===================================================================
--- branches/pdcgsoc/misc/temp.R 2008-07-09 07:43:05 UTC (rev 196)
+++ branches/pdcgsoc/misc/temp.R 2008-07-09 08:13:54 UTC (rev 197)
@@ -1,10 +1,12 @@
+require(phylobase)
+require(grid)
treePlot <- function(phy, type = 'phylogram', tip.order = NULL) {
- if (type = 'phylogram') {
+ if (type == 'phylogram') {
xxyy <- phyloXXYY(phy, tip.order)
}
- if (type = 'unrooted') {
+ if (type == 'unrooted') {
xxyy <- unrootxxyy(phy)
}
@@ -130,5 +132,5 @@
## How do we translate this info into a plot?
## Test code
-## out <- scratch(foo <- as(rcoal(5), 'phylo4'))
+out <- phyloXXYY(foo <- as(rcoal(5), 'phylo4'))
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