[Pgfsweave-commits] r31 - in pkg: . R exec inst inst/doc inst/doc/figs inst/example inst/misc/vignette-src inst/vignettes man src

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Tue Mar 20 07:51:39 CET 2012


Author: cameronbracken
Date: 2012-03-20 07:51:38 +0100 (Tue, 20 Mar 2012)
New Revision: 31

Added:
   pkg/.Rinstignore
   pkg/inst/misc/vignette-src/fig-pgfSweave-hist.eps
   pkg/inst/misc/vignette-src/fig-pgfSweave-hist.pgf
   pkg/inst/misc/vignette-src/fig-pgfSweave-tikz-hist.tikz
   pkg/inst/vignettes/
   pkg/inst/vignettes/fig-normalSweave.pdf
   pkg/inst/vignettes/fig-pgfSweave-hist.pgf
   pkg/inst/vignettes/fig-pgfSweave-tikz-hist.pdf
   pkg/inst/vignettes/fig-pgfSweave-tikz-hist.tikz
   pkg/inst/vignettes/pgfSweave-example-Rnw.in
   pkg/inst/vignettes/pgfSweave-example-tex.in
   pkg/inst/vignettes/pgfSweave-example.pdf
   pkg/inst/vignettes/pgfSweave-vignette-source.pdf
   pkg/inst/vignettes/pgfSweave.Rnw
   pkg/inst/vignettes/pgfSweave.pdf
   pkg/inst/vignettes/pgfSweave_hans.Rnw
   pkg/inst/vignettes/pgfSweave_hans.pdf
Removed:
   pkg/inst/doc/Sweave.sty
   pkg/inst/doc/figs/fig-normalSweave.pdf
   pkg/inst/doc/figs/fig-pgfSweave-hist.pdf
   pkg/inst/doc/figs/fig-pgfSweave-tikz-hist.pdf
   pkg/inst/doc/pgfSweave-example-Rnw.in
   pkg/inst/doc/pgfSweave-example-tex.in
   pkg/inst/doc/pgfSweave-example.pdf
   pkg/inst/doc/pgfSweave.Rnw
   pkg/inst/doc/pgfSweave.pdf
   pkg/inst/doc/pgfSweave_hans.Rnw
   pkg/inst/doc/pgfSweave_hans.pdf
   pkg/inst/misc/vignette-src/Sweave.sty
   pkg/src/Makevars
   pkg/src/dummy.c
Modified:
   pkg/ChangeLog
   pkg/DESCRIPTION
   pkg/NAMESPACE
   pkg/NEWS
   pkg/R/cacheSweaveUnexportedFunctions.R
   pkg/R/pgfSweave.R
   pkg/R/pgfSweaveDriver.R
   pkg/R/utilities.R
   pkg/R/zzz.R
   pkg/README.md
   pkg/exec/install-script.R
   pkg/exec/pgfsweave
   pkg/exec/pgfsweave-script.R
   pkg/inst/example/Makefile
   pkg/inst/example/pgfSweave-example.Rnw
   pkg/inst/example/pgfSweave-latex-example.Rnw
   pkg/inst/example/pgfSweave-xelatex-example.Rnw
   pkg/inst/misc/vignette-src/Makefile
   pkg/inst/misc/vignette-src/pgfSweave-vignette-source.Rnw
   pkg/man/pgfSweave.Rd
   pkg/man/pgfSweaveDriver.Rd
Log:
Merge branch 'master' into r-forge-local

Conflicts:
	ChangeLog
	DESCRIPTION
	NAMESPACE
	NEWS
	R/pgfSweave.R
	R/pgfSweaveDriver.R
	R/utilities.R
	R/zzz.R
	exec/pgfsweave-script.R
	inst/doc/figs/fig-normalSweave.pdf
	inst/doc/figs/fig-pgfSweave-hist.pdf
	inst/doc/pgfSweave.pdf
	inst/example/Makefile
	inst/example/pgfSweave-latex-example.Rnw
	inst/example/pgfSweave-xelatex-example.Rnw
	inst/misc/vignette-src/Makefile
	inst/misc/vignette-src/pgfSweave-vignette-source.Rnw
	inst/vignettes/fig-pgfSweave-tikz-hist.pdf
	inst/vignettes/pgfSweave-example-tex.in
	inst/vignettes/pgfSweave-example.pdf
	inst/vignettes/pgfSweave.Rnw
	man/pgfSweave.Rd
	man/pgfSweaveDriver.Rd

Added: pkg/.Rinstignore
===================================================================
--- pkg/.Rinstignore	                        (rev 0)
+++ pkg/.Rinstignore	2012-03-20 06:51:38 UTC (rev 31)
@@ -0,0 +1 @@
+doc/fig*[.]pdf$

Modified: pkg/ChangeLog
===================================================================
--- pkg/ChangeLog	2011-04-05 22:51:50 UTC (rev 30)
+++ pkg/ChangeLog	2012-03-20 06:51:38 UTC (rev 31)
@@ -1,387 +1,247 @@
-commit e1b1d11fee5419f1747636461a5af7f46248826f
-Merge: 629df4f 5536f8f
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 16:26:46 2011 -0600
+commit aa66d58c756608718e34787527f290aa59c2c78d
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Tue Apr 5 22:51:50 2011 +0000
 
-    Merge branch 'rel-patch2'
+    Version 1.2.1
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@30 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
 
-commit 629df4f8c9925ccf1a970d10552153ff26123ced
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 16:26:06 2011 -0600
-
-    Only try to call make if the makefile exists
-
- R/pgfSweave.R |   12 ++++++------
- 1 files changed, 6 insertions(+), 6 deletions(-)
-
-commit 5536f8f46e781bb2e8193dcbcbf2265b20612e34
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 16:15:56 2011 -0600
-
-    Apply rel2.patch
-
- R/pgfSweaveDriver.R |   23 +++++++++++++++++++++--
- 1 files changed, 21 insertions(+), 2 deletions(-)
-
-commit d6159fa723942cc7ad361290114e555404430d2f
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 16:05:14 2011 -0600
-
-    Slightly change message for re-run external chunks
-
- R/pgfSweaveDriver.R |    2 +-
- 1 files changed, 1 insertions(+), 1 deletions(-)
-
-commit edc5f628bb174fe19ae84884194863d7a1a41557
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 15:50:57 2011 -0600
-
-    Update NEWS
-
- NEWS |    5 +++--
- 1 files changed, 3 insertions(+), 2 deletions(-)
-
-commit ff49d90675be7118283af2120c93499cf9c164cf
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 15:48:58 2011 -0600
-
-    XeLaTeX example, see the warning in the file for directions on how to get around the bug in pgf
-
- inst/example/pgfSweave-xelatex-example.Rnw |   72 ++++++++++++++++++++++++++++
- 1 files changed, 72 insertions(+), 0 deletions(-)
-
-commit 2d57ccae18b14134aead7851da22cf8fade8d34a
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 14:55:03 2011 -0600
-
-    Fix the internal caching layer so that external graphics are now properly recreated only when the chunk has changed; also fixes the external library dependency feature
-
- R/pgfSweaveDriver.R |   21 +++++++++++----------
- R/utilities.R       |    2 +-
- 2 files changed, 12 insertions(+), 11 deletions(-)
-
-commit 5fc6321fe08d009b07dc89314ab1f8dda0cb7d6f
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Apr 5 13:24:53 2011 -0600
-
-    Add chunk options 'width' and 'height' to the chunk digest; when chages are made to these options but not the chunk code itself, still regenerate the graphic
-
- R/utilities.R |    2 +-
- 1 files changed, 1 insertions(+), 1 deletions(-)
-
-commit 7aa7eb28373f601b1d65d09e7b1c2b543c1d3a5a
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Mon Apr 4 14:45:24 2011 -0600
-
-    Add encoding to vignette for R 2.13
-
- ChangeLog                                          |   52 ++++++
- inst/doc/figs/fig-normalSweave.pdf                 |  Bin 12749 -> 12524 bytes
- inst/doc/figs/fig-pgfSweave-hist.pgf               |  186 +++++++++++---------
- inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 28614 -> 28559 bytes
- inst/doc/figs/fig-pgfSweave-tikz-hist.tikz         |   70 ++++----
- inst/doc/pgfSweave-example-tex.in                  |   10 +-
- inst/doc/pgfSweave-example.pdf                     |  Bin 78284 -> 76347 bytes
- inst/doc/pgfSweave.Rnw                             |    2 +
- inst/doc/pgfSweave.pdf                             |  Bin 327561 -> 288573 bytes
- .../vignette-src/pgfSweave-vignette-source.Rnw     |    2 +
- 10 files changed, 190 insertions(+), 132 deletions(-)
-
-commit 354e7f790cbf28be8fee88dbc4ee61a349770182
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Mon Apr 4 14:44:32 2011 -0600
-
-    Update News
-
- NEWS |   10 ++++++++++
- 1 files changed, 10 insertions(+), 0 deletions(-)
-
-commit 69700eb5e3bfbef6d743d1d719a5b663c799bc00
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Sun Apr 3 21:02:43 2011 -0600
-
-    Remove null device code since it can cause problems with grid graphics
-
- R/pgfSweaveDriver.R |    5 -----
- 1 files changed, 0 insertions(+), 5 deletions(-)
-
-commit 1db2157b7f913a011f23c9ac8912b7b265ce983c
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Sun Apr 3 17:21:07 2011 -0600
-
-    Bump version number, recompile vignette to only depend on PGF 2.00
-
- ChangeLog                                          |   51 ++++++
- DESCRIPTION                                        |    2 +-
- inst/doc/figs/fig-normalSweave.pdf                 |  Bin 2960 -> 12749 bytes
- inst/doc/figs/fig-pgfSweave-hist.pgf               |  188 +++++++++-----------
- inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 28559 -> 28614 bytes
- inst/doc/figs/fig-pgfSweave-tikz-hist.tikz         |   74 ++++----
- inst/doc/pgfSweave-example-tex.in                  |    2 -
- inst/doc/pgfSweave-example.pdf                     |  Bin 78061 -> 78284 bytes
+ ChangeLog                                          |  159 +++++++++++++++++
+ DESCRIPTION                                        |    4 +-
+ NEWS                                               |   14 ++
+ R/pgfSweave.R                                      |   30 +++-
+ R/pgfSweaveDriver.R                                |   60 +++++---
+ R/utilities.R                                      |    2 +-
+ R/zzz.R                                            |    9 +-
+ inst/doc/figs/fig-normalSweave.pdf                 |  Bin 3083 -> 2839 bytes
+ inst/doc/figs/fig-pgfSweave-hist.pgf               |  180 +++++++++-----------
+ inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 28532 -> 28507 bytes
+ inst/doc/figs/fig-pgfSweave-tikz-hist.tikz         |   99 +++++++++++
+ inst/doc/pgfSweave-example.pdf                     |  Bin 78081 -> 78304 bytes
  inst/doc/pgfSweave.Rnw                             |   21 +--
- inst/doc/pgfSweave.pdf                             |  Bin 281287 -> 327561 bytes
- inst/misc/vignette-src/Makefile                    |    5 +-
- .../vignette-src/pgfSweave-vignette-source.Rnw     |   10 +-
- 12 files changed, 191 insertions(+), 162 deletions(-)
+ inst/doc/pgfSweave.pdf                             |  Bin 281248 -> 279712 bytes
+ inst/doc/pgfSweave_hans.pdf                        |  Bin 236197 -> 236197 bytes
+ inst/example/pgfSweave-xelatex-example.Rnw         |   72 ++++++++
+ inst/misc/vignette-src/Makefile                    |    6 +-
+ .../vignette-src/pgfSweave-vignette-source.Rnw     |   12 +-
+ 18 files changed, 515 insertions(+), 153 deletions(-)
 
-commit 21154a3acba563ecd2cb2586bb02dfad7acf0acb
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Sun Apr 3 17:20:13 2011 -0600
+commit 4fa53701f9a33ca6df711a36922ca088e5a508d7
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Wed Mar 23 23:50:37 2011 +0000
 
-    Allow package to be installed if PGF 2.10 is not available but issue
-    message at startup.
+    Re-add pgf file and rebuild for release
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@29 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
 
- R/zzz.R |    9 ++++++---
- 1 files changed, 6 insertions(+), 3 deletions(-)
+ ChangeLog                                 |   51 ++++++
+ inst/doc/figs/fig-normalSweave.pdf        |  Bin 2960 -> 3083 bytes
+ inst/doc/figs/fig-pgfSweave-hist.pgf      |  248 +++++++++++++++++++++++++++++
+ inst/doc/figs/fig-pgfSweave-tikz-hist.pdf |  Bin 28559 -> 28532 bytes
+ inst/doc/pgfSweave-example.pdf            |  Bin 78061 -> 78081 bytes
+ inst/doc/pgfSweave.pdf                    |  Bin 281287 -> 281248 bytes
+ inst/doc/pgfSweave_hans.pdf               |  Bin 236197 -> 236197 bytes
+ 7 files changed, 299 insertions(+), 0 deletions(-)
 
-commit 1443cf949766b3dcd598a6d94ef799e1abc74c6d
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Sun Apr 3 17:17:55 2011 -0600
+commit ecf77eedf08b388d78d22bf43e1b4ee30712e798
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Wed Mar 23 23:39:05 2011 +0000
 
-    Dont include \tikzexternalfiledependsonfile command because it caused
-    figures to get recompiled every time. Only put in list and make command
-    the first time.
+    Version 1.2
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@28 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
 
- R/pgfSweaveDriver.R |   23 ++++++++++++++---------
- 1 files changed, 14 insertions(+), 9 deletions(-)
-
-commit 103005f9ced1a9e07599f5625a1bd6456441473c
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Sun Apr 3 17:16:20 2011 -0600
-
-    Do not run (pdf)latex initially when makefile exists
-
- R/pgfSweave.R                              |   22 ++-
- inst/doc/figs/fig-pgfSweave-hist.pgf       |  255 ++++++++++++++++++++++++++++
- inst/doc/figs/fig-pgfSweave-tikz-hist.tikz |  110 ++++++++++++
- 3 files changed, 381 insertions(+), 6 deletions(-)
-
-commit 224c98c100ecaeb90085b30e5978e3736f97e6f1
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Wed Mar 23 17:32:21 2011 -0600
-
-    Fix bug where code was chached when cache=F and explicitly turn off
-    externalizaton when external is not TRUE so that custom commands (such
-    as xelatex) can be used.
-
- R/pgfSweaveDriver.R |   14 +++++++++++++-
- inst/tests/tidy.Rnw |    2 +-
- 2 files changed, 14 insertions(+), 2 deletions(-)
-
-commit 52c8ea46d491ce1917c57c979ab8860f0b9c85a8
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Wed Mar 23 16:25:58 2011 -0600
-
-    Re-add vignette files
-
- inst/doc/figs/fig-pgfSweave-hist.pdf |  Bin 0 -> 16274 bytes
- inst/doc/pgfSweave.pdf               |  Bin 0 -> 281287 bytes
- 2 files changed, 0 insertions(+), 0 deletions(-)
-
-commit 027c008b4685f03fdd3076f3d0cdd233d2eecc37
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Wed Mar 23 16:23:40 2011 -0600
-
-    Rebuild vignette
-
- inst/doc/pgfSweave_hans.pdf |  Bin 236197 -> 236197 bytes
- 1 files changed, 0 insertions(+), 0 deletions(-)
-
-commit 40afcea9f28aaee1e02d43ba10efae7381a05cd1
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Wed Mar 16 15:56:15 2011 -0600
-
-    Update documentation and improve command line script
-
- ChangeLog                                          |   14 ++
+ ChangeLog                                          |  101 +++++++++++++++
  DESCRIPTION                                        |    2 +-
  NEWS                                               |    3 +
  R/pgfSweave.R                                      |    9 +-
+ R/pgfSweaveDriver.R                                |   16 ++-
  exec/pgfsweave-script.R                            |  136 +++++++------------
- inst/doc/figs/fig-normalSweave.pdf                 |  Bin 3083 -> 2960 bytes
- inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 28559 -> 28559 bytes
+ inst/doc/figs/fig-normalSweave.pdf                 |  Bin 3056 -> 2960 bytes
+ inst/doc/figs/fig-pgfSweave-hist.pdf               |  Bin 0 -> 16274 bytes
+ inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 28512 -> 28559 bytes
  inst/doc/pgfSweave-example.pdf                     |  Bin 78117 -> 78061 bytes
- inst/doc/pgfSweave.Rnw                             |   80 +++++++-----
- inst/doc/pgfSweave_hans.pdf                        |  Bin 236093 -> 236197 bytes
+ inst/doc/pgfSweave.Rnw                             |   84 ++++++++-----
+ inst/doc/pgfSweave.pdf                             |  Bin 288991 -> 281287 bytes
+ inst/doc/pgfSweave_hans.Rnw                        |    2 +-
+ inst/doc/pgfSweave_hans.pdf                        |  Bin 0 -> 236197 bytes
+ inst/example/caching.Rnw                           |    2 +-
+ inst/misc/vignette-src/Makefile                    |   14 ++-
  .../vignette-src/pgfSweave-vignette-source.Rnw     |   80 +++++++-----
+ inst/tests/tidy.Rnw                                |    2 +-
  man/pgfSweave.Rd                                   |   12 +-
- 12 files changed, 179 insertions(+), 157 deletions(-)
+ 19 files changed, 295 insertions(+), 168 deletions(-)
 
-commit 881f0fae6aff0dbe021007f6166401df6f030777
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Feb 22 13:36:26 2011 -0700
+commit 295a7ef164f1d7b5ee6c344ffdb5faeddd313f46
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Tue Feb 22 19:15:17 2011 +0000
 
-    Actually build both vignettes correctly
+    Squashed commit of the following:
+    
+    commit d38f61ceb6549a73e070ee20befeafb3027902ae
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Tue Feb 22 12:11:52 2011 -0700
+    
+        Update PGF version check to 2.10
+    
+    commit 0bad74ef4c42e0a33e6dd2e94510c4722524bff9
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Tue Feb 22 11:59:02 2011 -0700
+    
+        Use the correct options function in the driver
+    
+    commit 2ec6cea4fa2c3e1d7531238f27566c0ac24ef78d
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Mon Feb 21 17:13:58 2011 -0700
+    
+        Remove everything from the tex.driver option
+    
+    commit 844d9a9d6c95b966a1bdaf3f2e732ad99058d9b2
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Mon Feb 21 17:09:21 2011 -0700
+    
+        Update to the documentation and vignette with recent changes, new
+        example of using tikz externalization library to generate eps graphics
+    
+    commit 4d07efb597e262913c5112aa712686da9278f043
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Tue Feb 8 14:07:39 2011 -0700
+    
+        Redefine Houtput environment to use \raggedright to avoid the extra space added by flushleft
+    
+    commit b83eeceb5b7db4c388ddb92140cb5a0c07895a86
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Fri Jan 21 10:27:33 2011 -0700
+    
+        Greatly reduce package load time (from 5 to 1 second) by using import
+        instead of depends
+    
+    commit 916336bf42692191836e42a2f4e8b378854121d5
+    Author: cameronbracken <cameron.bracken at gmail.com>
+    Date:   Tue Jan 18 17:33:58 2011 -0700
+    
+        First cut using the tikz external library, also generate highlighted
+        output in a special environment. See full commit message for details
+    
+        - Use the tikz external library with the `list and make` option. This
+          option allows for externalized graphic dependency checking and
+          parallel compilation of external graphics
+    
+          - The tikz external library with this option uses a slightly
+            different workflow, namely:
+    
+            1. Run (pdf)latex once to generate a makefile with graphic
+               dependencies
+            2. Run make to externalize graphics
+            3. Run (pdf)latex again
+    
+          - pgfSweave() and pgfSweave-script.R have been updated accordingly
+            and now have a new option to specify the number of processors
+          - All the old externalization command stuff has been removed, so no
+            more .sh file!
+          - Instead of the \pgfrealjobname command added, the \tikzexternalize
+            command is added automatically in addition to the
+          - Also use the \tikzexternalfiledependsonfile feature to add
+            dependency on the .tikz file
+    
+        - Externalized graphics now have another layer of crude caching on their
+          own, this was attempted before but now works correctly.  A digest of
+          the entire chunk is computed and stored in a stashR database for the
+          chunk (if cache is already TRUE, then the existing db is used). If
+          anything changes in the code chunk at all, including white space, the
+          graphic is updated, otherwise the figure is not regenerated.  This
+          also helps a bit for plain pdf and eps output.
+    
+        - Highlighted output is now output in a `Houtput` environment just like
+          the regular Sweave echo'd output. This environment is defined by
+          default to be a `flushleft` environment so that graphics can be
+          centered with \centering or something similar. This environment can also
+          be redefined by the user with \renewenvironment
+    
+        - Move some functions around and add some more comments
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@27 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
 
- ChangeLog                                 |   19 +++++++++++++++++++
- inst/doc/figs/fig-normalSweave.pdf        |  Bin 2965 -> 3083 bytes
- inst/doc/figs/fig-pgfSweave-tikz-hist.pdf |  Bin 28550 -> 28559 bytes
- inst/doc/pgfSweave-example.pdf            |  Bin 78117 -> 78117 bytes
- inst/doc/pgfSweave_hans.pdf               |  Bin 236093 -> 236093 bytes
- inst/misc/vignette-src/Makefile           |    4 ++--
- 6 files changed, 21 insertions(+), 2 deletions(-)
-
-commit e61e2260041fa50209ff553e70a44d3733d99b8f
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Feb 22 13:31:47 2011 -0700
-
-    Fix automatic building of Hans' vignette
-
- ChangeLog                                 |   68 +++++++++++++++++++++++++++++
- R/pgfSweaveDriver.R                       |    2 +-
- inst/doc/figs/fig-normalSweave.pdf        |  Bin 3056 -> 2965 bytes
- inst/doc/figs/fig-pgfSweave-tikz-hist.pdf |  Bin 28512 -> 28550 bytes
- inst/doc/pgfSweave-example.pdf            |  Bin 78117 -> 78117 bytes
- inst/doc/pgfSweave.Rnw                    |    4 +-
- inst/doc/pgfSweave.pdf                    |  Bin 288991 -> 0 bytes
- inst/doc/pgfSweave_hans.Rnw               |    2 +-
- inst/doc/pgfSweave_hans.pdf               |  Bin 0 -> 236093 bytes
- inst/example/caching.Rnw                  |    2 +-
- inst/misc/vignette-src/Makefile           |   12 ++++-
- 11 files changed, 82 insertions(+), 8 deletions(-)
-
-commit d7c4386fbd6101d874ca024ab8a27650ba6e9dfe
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Feb 22 13:13:32 2011 -0700
-
-    Fix options call
-
- R/pgfSweaveDriver.R    |    2 +-
- inst/doc/pgfSweave.pdf |  Bin 288991 -> 288991 bytes
- 2 files changed, 1 insertions(+), 1 deletions(-)
-
-commit d38f61ceb6549a73e070ee20befeafb3027902ae
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Feb 22 12:11:52 2011 -0700
-
-    Update PGF version check to 2.10
-
- R/zzz.R |   12 ++++++------
- 1 files changed, 6 insertions(+), 6 deletions(-)
-
-commit 0bad74ef4c42e0a33e6dd2e94510c4722524bff9
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Feb 22 11:59:02 2011 -0700
-
-    Use the correct options function in the driver
-
- R/pgfSweaveDriver.R |    2 +-
- 1 files changed, 1 insertions(+), 1 deletions(-)
-
-commit 2ec6cea4fa2c3e1d7531238f27566c0ac24ef78d
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Mon Feb 21 17:13:58 2011 -0700
-
-    Remove everything from the tex.driver option
-
- R/pgfSweaveDriver.R                                |   47 +-------------------
- .../vignette-src/pgfSweave-vignette-source.Rnw     |    2 +-
- man/pgfSweaveDriver.Rd                             |    6 +--
- 3 files changed, 3 insertions(+), 52 deletions(-)
-
-commit 844d9a9d6c95b966a1bdaf3f2e732ad99058d9b2
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Mon Feb 21 17:09:21 2011 -0700
-
-    Update to the documentation and vignette with recent changes, new
-    example of using tikz externalization library to generate eps graphics
-
- ChangeLog                                          |  106 +++++++++++++++
- DESCRIPTION                                        |   10 +-
- NEWS                                               |   26 ++++-
+ ChangeLog                                          |  106 ++++++++
+ DESCRIPTION                                        |   16 +-
+ NAMESPACE                                          |    3 +
+ NEWS                                               |   26 ++-
+ R/cacheSweaveUnexportedFunctions.R                 |   73 ++++++-
+ R/pgfSweave.R                                      |   41 ++--
+ R/pgfSweaveDriver.R                                |  255 +++++++-------------
+ R/utilities.R                                      |  205 ++--------------
+ R/zzz.R                                            |   12 +-
  README.md                                          |    4 +-
+ exec/pgfsweave-script.R                            |   46 ++--
  inst/doc/figs/fig-normalSweave.pdf                 |  Bin 2965 -> 3056 bytes
  inst/doc/figs/fig-pgfSweave-hist.pdf               |  Bin 16286 -> 0 bytes
  inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 26912 -> 28512 bytes
  inst/doc/pgfSweave-example-Rnw.in                  |    8 +-
- inst/doc/pgfSweave-example-tex.in                  |   32 +++--
+ inst/doc/pgfSweave-example-tex.in                  |   32 ++-
  inst/doc/pgfSweave-example.pdf                     |  Bin 78139 -> 78117 bytes
- inst/doc/pgfSweave.Rnw                             |  135 +++++++++++++++-----
+ inst/doc/pgfSweave.Rnw                             |  135 ++++++++---
  inst/doc/pgfSweave.pdf                             |  Bin 278812 -> 288991 bytes
  inst/doc/pgfSweave_hans.pdf                        |  Bin 236105 -> 0 bytes
  inst/example/Makefile                              |   10 +-
- inst/example/pgfSweave-example.Rnw                 |    2 +
- inst/example/pgfSweave-latex-example.Rnw           |   50 +++++++
+ inst/example/pgfSweave-example.Rnw                 |    8 +-
+ inst/example/pgfSweave-latex-example.Rnw           |   50 ++++
  inst/misc/vignette-src/Makefile                    |   11 +-
- .../vignette-src/pgfSweave-vignette-source.Rnw     |   89 +++++++++++---
+ .../vignette-src/pgfSweave-vignette-source.Rnw     |   89 ++++++--
  inst/tests/Makefile                                |    2 +-
- man/pgfSweave.Rd                                   |   29 +++--
- 20 files changed, 424 insertions(+), 90 deletions(-)
+ man/pgfSweave.Rd                                   |   29 ++-
+ man/pgfSweaveDriver.Rd                             |    6 +-
+ 28 files changed, 674 insertions(+), 493 deletions(-)
 
-commit 4d07efb597e262913c5112aa712686da9278f043
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Feb 8 14:07:39 2011 -0700
+commit 8bc0e8fa8a3e92f821d35cd90228172e4b179a67
+Merge: 4fb8675 40a152d
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Mon Jan 17 00:02:51 2011 +0000
 
-    Redefine Houtput environment to use \raggedright to avoid the extra space added by flushleft
-
- R/pgfSweaveDriver.R |    2 +-
- 1 files changed, 1 insertions(+), 1 deletions(-)
-
-commit b83eeceb5b7db4c388ddb92140cb5a0c07895a86
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Fri Jan 21 10:27:33 2011 -0700
-
-    Greatly reduce package load time (from 5 to 1 second) by using import
-    instead of depends
-
- DESCRIPTION             |    6 +++---
- NAMESPACE               |    3 +++
- R/pgfSweaveDriver.R     |   18 +++++++++++-------
- exec/pgfsweave-script.R |    4 ----
- 4 files changed, 17 insertions(+), 14 deletions(-)
-
-commit 916336bf42692191836e42a2f4e8b378854121d5
-Author: cameronbracken <cameron.bracken at gmail.com>
-Date:   Tue Jan 18 17:33:58 2011 -0700
-
-    First cut using the tikz external library, also generate highlighted
-    output in a special environment. See full commit message for details
+    Version 1.1.3 RC1 (missing files)
     
-    - Use the tikz external library with the `list and make` option. This
-      option allows for externalized graphic dependency checking and
-      parallel compilation of external graphics
+    Merge branch 'master' into r-forge-local
     
-      - The tikz external library with this option uses a slightly
-        different workflow, namely:
+    Conflicts:
+    	inst/example/pgfSweave-example.tex
     
-        1. Run (pdf)latex once to generate a makefile with graphic
-           dependencies
-        2. Run make to externalize graphics
-        3. Run (pdf)latex again
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@26 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
+
+commit 4fb8675e9b95034fabab767ac0a17eaec0b687e8
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Sun Jan 16 23:59:41 2011 +0000
+
+    Version 1.1.3 RC1
     
-      - pgfSweave() and pgfSweave-script.R have been updated accordingly
-        and now have a new option to specify the number of processors
-      - All the old externalization command stuff has been removed, so no
-        more .sh file!
-      - Instead of the \pgfrealjobname command added, the \tikzexternalize
-        command is added automatically in addition to the
-      - Also use the \tikzexternalfiledependsonfile feature to add
-        dependency on the .tikz file
-    
-    - Externalized graphics now have another layer of crude caching on their
-      own, this was attempted before but now works correctly.  A digest of
-      the entire chunk is computed and stored in a stashR database for the
-      chunk (if cache is already TRUE, then the existing db is used). If
-      anything changes in the code chunk at all, including white space, the
-      graphic is updated, otherwise the figure is not regenerated.  This
-      also helps a bit for plain pdf and eps output.
-    
-    - Highlighted output is now output in a `Houtput` environment just like
-      the regular Sweave echo'd output. This environment is defined by
-      default to be a `flushleft` environment so that graphics can be
-      centered with \centering or something similar. This environment can also
-      be redefined by the user with \renewenvironment
-    
-    - Move some functions around and add some more comments
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@25 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
 
- R/cacheSweaveUnexportedFunctions.R |   73 +++++++++++++-
- R/pgfSweave.R                      |   41 ++++----
- R/pgfSweaveDriver.R                |  194 +++++++++++++++-------------------
- R/utilities.R                      |  205 ++++--------------------------------
- exec/pgfsweave-script.R            |   42 +++++---
- inst/example/pgfSweave-example.Rnw |    6 +-
- 6 files changed, 227 insertions(+), 334 deletions(-)
+ ChangeLog                                          |  363 ++++++++++++++++
+ DESCRIPTION                                        |   10 +-
+ NEWS                                               |   15 +-
+ R/pgfSweaveDriver.R                                |  452 +++++++++++---------
+ R/utilities.R                                      |  282 +++++++------
+ R/zzz.R                                            |   86 ++--
+ README.md                                          |  110 +-----
+ inst/doc/figs/fig-normalSweave.pdf                 |  Bin 3139 -> 2965 bytes
+ inst/doc/figs/fig-pgfSweave-hist.pdf               |  Bin 16297 -> 16286 bytes
+ inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 26936 -> 26912 bytes
+ inst/doc/pgfSweave-example-Rnw.in                  |   12 +-
+ inst/doc/pgfSweave-example-tex.in                  |   18 +-
+ inst/doc/pgfSweave-example.pdf                     |  Bin 27626 -> 78139 bytes
+ inst/doc/pgfSweave.Rnw                             |  141 ++++---
+ inst/doc/pgfSweave.pdf                             |  Bin 258644 -> 278812 bytes
+ inst/doc/pgfSweave_hans.Rnw                        |  379 ++++++++++++++++
+ inst/doc/pgfSweave_hans.pdf                        |  Bin 0 -> 236105 bytes
+ inst/example/Makefile                              |    5 +-
+ inst/example/caching.Rnw                           |  148 +++++++
+ inst/example/pgfSweave-example.Rnw                 |   10 +-
+ inst/misc/test-for-pgf.tex                         |    2 +-
+ inst/misc/vignette-src/Makefile                    |   17 +-
+ .../vignette-src/pgfSweave-vignette-source.Rnw     |  101 +++--
+ inst/tests/Makefile                                |   11 +
+ inst/tests/tidy.Rnw                                |   22 +
+ inst/tests/tidy2.Rnw                               |  110 +++++
+ man/pgfSweaveDriver.Rd                             |    4 +-
+ 27 files changed, 1688 insertions(+), 610 deletions(-)
 
 commit 40a152d1531f4f62c101c92ef6afcd3630f148cd
 Author: cameronbracken <cameron.bracken at gmail.com>
@@ -730,6 +590,18 @@
  inst/example/pgfSweave-example.tex |  424 ------------------------------------
  7 files changed, 21 insertions(+), 453 deletions(-)
 
+commit c53d2384e63c25a69080f328b72a11242ef7c11e
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Sat Dec 18 00:12:34 2010 +0000
+
+    Update NEWS and version number
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@24 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
+
+ DESCRIPTION |    4 ++--
+ NEWS        |   13 +++++++++++++
+ 2 files changed, 15 insertions(+), 2 deletions(-)
+
 commit 93accdf3f78829c601e0a35ee111086c71562646
 Author: cameronbracken <cameron.bracken at gmail.com>
 Date:   Fri Dec 17 17:11:05 2010 -0700
@@ -740,6 +612,31 @@
  NEWS        |   13 +++++++++++++
  2 files changed, 15 insertions(+), 2 deletions(-)
 
+commit b399d2ad5ec7a19dd8bff8ee13f8cd7041e61622
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Sat Dec 18 00:05:08 2010 +0000
+
+    Various bug fixes and maintainence
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@23 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
+
+ ChangeLog                                          |   55 ++++++++++++++++++++
+ DESCRIPTION                                        |    4 +-
+ R/pgfSweaveDriver.R                                |    5 +-
+ exec/install-script.R                              |   36 ++++++++-----
+ inst/doc/figs/fig-normalSweave.pdf                 |  Bin 2960 -> 3139 bytes
+ inst/doc/figs/fig-pgfSweave-hist.pdf               |  Bin 16275 -> 16297 bytes
+ inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 26946 -> 26936 bytes
+ inst/doc/pgfSweave-example.pdf                     |  Bin 76205 -> 27626 bytes
+ inst/doc/pgfSweave.Rnw                             |   11 +++--
+ inst/doc/pgfSweave.pdf                             |  Bin 270239 -> 258644 bytes
+ inst/example/pgfSweave-example.Rnw                 |    2 +-
+ inst/example/pgfSweave-example.tex                 |    1 +
+ .../vignette-src/pgfSweave-vignette-source.Rnw     |   11 +++--
+ man/pgfSweaveDriver.Rd                             |    2 +-
+ src/Makevars                                       |    2 +-
+ 15 files changed, 100 insertions(+), 29 deletions(-)
+
 commit d79d82577d58f2af5c367081ef4d6675c3435982
 Author: cameronbracken <cameron.bracken at gmail.com>
 Date:   Fri Dec 17 16:50:53 2010 -0700
@@ -796,6 +693,34 @@
  man/pgfSweaveDriver.Rd                             |    2 +-
  10 files changed, 85 insertions(+), 438 deletions(-)
 
+commit d5875d8cc311c4d80213750953d2c093a0a91e37
+Author: cameronbracken <cameronbracken at edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
+Date:   Mon Nov 29 11:41:13 2010 +0000
+
+    hmm
+    
+    git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/pgfsweave/pkg@22 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
+
+ ChangeLog                                          | 1084 +++++---------------
+ DESCRIPTION                                        |   23 +-
+ NEWS                                               |   21 +
+ R/pgfSweaveDriver.R                                |  416 +++++----
+ R/utilities.R                                      |  184 ++++
+ README.md                                          |   30 +-
+ inst/doc/figs/fig-normalSweave.pdf                 |  Bin 4570 -> 2960 bytes
+ inst/doc/figs/fig-pgfSweave-hist.pdf               |  Bin 16299 -> 16275 bytes
+ inst/doc/figs/fig-pgfSweave-tikz-hist.pdf          |  Bin 26930 -> 26946 bytes
+ inst/doc/pgfSweave-example-Rnw.in                  |   23 +-
+ inst/doc/pgfSweave-example-tex.in                  |  401 +++++++-
+ inst/doc/pgfSweave-example.pdf                     |  Bin 82948 -> 76205 bytes
+ inst/doc/pgfSweave.Rnw                             |  519 +++++++++-
+ inst/doc/pgfSweave.pdf                             |  Bin 260616 -> 270239 bytes
+ inst/example/pgfSweave-example.Rnw                 |   23 +-
+ inst/example/pgfSweave-example.tex                 |  401 +++++++-
+ .../vignette-src/pgfSweave-vignette-source.Rnw     |  116 ++-
+ man/pgfSweaveDriver.Rd                             |   10 +-
+ 18 files changed, 2123 insertions(+), 1128 deletions(-)
+
 commit 185ce5677556e845293214973b45cd42c26977a5
 Author: cameronbracken <cameron.bracken at gmail.com>
 Date:   Mon Nov 29 04:36:59 2010 -0700
@@ -959,6 +884,21 @@
  DESCRIPTION |    2 +-
[TRUNCATED]

To get the complete diff run:
    svnlook diff /svnroot/pgfsweave -r 31


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