From noreply at r-forge.r-project.org Tue Apr 4 14:47:08 2017 From: noreply at r-forge.r-project.org (noreply at r-forge.r-project.org) Date: Tue, 4 Apr 2017 14:47:08 +0200 (CEST) Subject: [Patchwork-commits] r221 - .git .git/logs .git/logs/refs/heads .git/logs/refs/remotes/origin .git/refs/heads .git/refs/remotes/origin www Message-ID: <20170404124708.CA35C187841@r-forge.r-project.org> Author: sebastian_d Date: 2017-04-04 14:47:08 +0200 (Tue, 04 Apr 2017) New Revision: 221 Modified: .git/COMMIT_EDITMSG .git/index .git/logs/HEAD .git/logs/refs/heads/master .git/logs/refs/remotes/origin/master .git/refs/heads/master .git/refs/remotes/origin/master www/TAPS_inst.php Log: adding requirement xlsx homepage Modified: .git/COMMIT_EDITMSG =================================================================== --- .git/COMMIT_EDITMSG 2017-02-03 12:39:12 UTC (rev 220) +++ .git/COMMIT_EDITMSG 2017-04-04 12:47:08 UTC (rev 221) @@ -1 +1 @@ -update to TAPS installation information doMC windows +adding requirement xlsx Modified: .git/index =================================================================== (Binary files differ) Modified: .git/logs/HEAD =================================================================== --- .git/logs/HEAD 2017-02-03 12:39:12 UTC (rev 220) +++ .git/logs/HEAD 2017-04-04 12:47:08 UTC (rev 221) @@ -103,3 +103,5 @@ 4bbde19cc8582ba3fb6caf01b1b01165c5db15d6 0a1de5c432ad323bbac1093425e9a939f351b50b Sebastian DiLorenzo 1445255649 +0200 pull: Fast-forward 0a1de5c432ad323bbac1093425e9a939f351b50b 0b2b81a68a67ce90b6f3c8d65b3cbab6636348b7 Sebastian DiLorenzo 1448272403 +0100 pull: Fast-forward 0b2b81a68a67ce90b6f3c8d65b3cbab6636348b7 905b1a114fbfb770dc9aa4674cb60f9c3e95c68a Sebastian DiLorenzo 1486124938 +0100 pull: Fast-forward +905b1a114fbfb770dc9aa4674cb60f9c3e95c68a 25566489a05688365319553246efc0cee804b1cb Sebastian DiLorenzo 1486125695 +0100 commit: adding info that either reference or normal should be given, but not both +25566489a05688365319553246efc0cee804b1cb c24a92206396addcb8232ab0c4d6b3ae804edb98 Sebastian DiLorenzo 1491309934 +0200 commit: adding requirement xlsx Modified: .git/logs/refs/heads/master =================================================================== --- .git/logs/refs/heads/master 2017-02-03 12:39:12 UTC (rev 220) +++ .git/logs/refs/heads/master 2017-04-04 12:47:08 UTC (rev 221) @@ -103,3 +103,5 @@ 4bbde19cc8582ba3fb6caf01b1b01165c5db15d6 0a1de5c432ad323bbac1093425e9a939f351b50b Sebastian DiLorenzo 1445255649 +0200 pull: Fast-forward 0a1de5c432ad323bbac1093425e9a939f351b50b 0b2b81a68a67ce90b6f3c8d65b3cbab6636348b7 Sebastian DiLorenzo 1448272403 +0100 pull: Fast-forward 0b2b81a68a67ce90b6f3c8d65b3cbab6636348b7 905b1a114fbfb770dc9aa4674cb60f9c3e95c68a Sebastian DiLorenzo 1486124938 +0100 pull: Fast-forward +905b1a114fbfb770dc9aa4674cb60f9c3e95c68a 25566489a05688365319553246efc0cee804b1cb Sebastian DiLorenzo 1486125695 +0100 commit: adding info that either reference or normal should be given, but not both +25566489a05688365319553246efc0cee804b1cb c24a92206396addcb8232ab0c4d6b3ae804edb98 Sebastian DiLorenzo 1491309934 +0200 commit: adding requirement xlsx Modified: .git/logs/refs/remotes/origin/master =================================================================== --- .git/logs/refs/remotes/origin/master 2017-02-03 12:39:12 UTC (rev 220) +++ .git/logs/refs/remotes/origin/master 2017-04-04 12:47:08 UTC (rev 221) @@ -100,3 +100,5 @@ 4bbde19cc8582ba3fb6caf01b1b01165c5db15d6 0a1de5c432ad323bbac1093425e9a939f351b50b Sebastian DiLorenzo 1445255649 +0200 pull: fast-forward 0a1de5c432ad323bbac1093425e9a939f351b50b 0b2b81a68a67ce90b6f3c8d65b3cbab6636348b7 Sebastian DiLorenzo 1448272403 +0100 pull: fast-forward 0b2b81a68a67ce90b6f3c8d65b3cbab6636348b7 905b1a114fbfb770dc9aa4674cb60f9c3e95c68a Sebastian DiLorenzo 1486124937 +0100 pull: fast-forward +905b1a114fbfb770dc9aa4674cb60f9c3e95c68a 25566489a05688365319553246efc0cee804b1cb Sebastian DiLorenzo 1486125703 +0100 update by push +25566489a05688365319553246efc0cee804b1cb c24a92206396addcb8232ab0c4d6b3ae804edb98 Sebastian DiLorenzo 1491309940 +0200 update by push Modified: .git/refs/heads/master =================================================================== --- .git/refs/heads/master 2017-02-03 12:39:12 UTC (rev 220) +++ .git/refs/heads/master 2017-04-04 12:47:08 UTC (rev 221) @@ -1 +1 @@ -905b1a114fbfb770dc9aa4674cb60f9c3e95c68a +c24a92206396addcb8232ab0c4d6b3ae804edb98 Modified: .git/refs/remotes/origin/master =================================================================== --- .git/refs/remotes/origin/master 2017-02-03 12:39:12 UTC (rev 220) +++ .git/refs/remotes/origin/master 2017-04-04 12:47:08 UTC (rev 221) @@ -1 +1 @@ -905b1a114fbfb770dc9aa4674cb60f9c3e95c68a +c24a92206396addcb8232ab0c4d6b3ae804edb98 Modified: www/TAPS_inst.php =================================================================== --- www/TAPS_inst.php 2017-02-03 12:39:12 UTC (rev 220) +++ www/TAPS_inst.php 2017-04-04 12:47:08 UTC (rev 221) @@ -16,6 +16,7 @@ install.packages("fields") install.packages("foreach") install.packages("jpeg") + install.packages("xlsx") #Only on unix-based systems install.packages("doMC") @@ -37,4 +38,4 @@ If something still does not work with installation, here is a link to the location of the source file:
- TAPS
\ No newline at end of file + TAPS
From noreply at r-forge.r-project.org Tue Apr 4 14:52:48 2017 From: noreply at r-forge.r-project.org (noreply at r-forge.r-project.org) Date: Tue, 4 Apr 2017 14:52:48 +0200 (CEST) Subject: [Patchwork-commits] r222 - www Message-ID: <20170404125248.940B8187841@r-forge.r-project.org> Author: sebastian_d Date: 2017-04-04 14:52:48 +0200 (Tue, 04 Apr 2017) New Revision: 222 Modified: www/TAPS_inst.php Log: bioclite taps req Modified: www/TAPS_inst.php =================================================================== --- www/TAPS_inst.php 2017-04-04 12:47:08 UTC (rev 221) +++ www/TAPS_inst.php 2017-04-04 12:52:48 UTC (rev 222) @@ -11,8 +11,9 @@ Install the packages that TAPS depends on to function correctly.

-    install.packages("DNAcopy")
-    install.packages("affxparser")
+    source("https://bioconductor.org/biocLite.R")
+    biocLite("DNAcopy")
+    biocLite("affxparser")
     install.packages("fields")
     install.packages("foreach")
     install.packages("jpeg")