[Patchwork-commits] r209 - .git .git/logs .git/logs/refs/heads .git/logs/refs/remotes/origin .git/refs/heads .git/refs/remotes/origin pkg/TAPS/R

[noreply at r-forge.r-project.org]

Author: sebastian_d
Date: 2014-05-13 15:13:38 +0200 (Tue, 13 May 2014)
New Revision: 209

Modified:
   .git/index
   .git/logs/HEAD
   .git/logs/refs/heads/master
   .git/logs/refs/remotes/origin/master
   .git/refs/heads/master
   .git/refs/remotes/origin/master
   pkg/TAPS/R/TAPS.r
Log:
bjorn update doMC

Modified: .git/index
===================================================================
(Binary files differ)

Modified: .git/logs/HEAD
===================================================================
--- .git/logs/HEAD	2014-05-13 13:11:37 UTC (rev 208)
+++ .git/logs/HEAD	2014-05-13 13:13:38 UTC (rev 209)
@@ -90,3 +90,4 @@
 79c9a62cd0b934e0f252e2fb660c26ffeeeea825 cb2b4bc53aac68ec1b56532dbbded71b4eca7582 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1398692432 +0200	pull: Fast-forward
 cb2b4bc53aac68ec1b56532dbbded71b4eca7582 3bd7f01d1011acc7afac8a149cd922137804fd77 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399362996 +0200	commit: hotfix cy750K
 3bd7f01d1011acc7afac8a149cd922137804fd77 18800d736527a84881558f1f00ba4af0f62807fe Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399972601 +0200	pull: Fast-forward
+18800d736527a84881558f1f00ba4af0f62807fe 933655cc7d8def1beddb1f60ed576d1653ef8504 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399986792 +0200	pull: Fast-forward

Modified: .git/logs/refs/heads/master
===================================================================
--- .git/logs/refs/heads/master	2014-05-13 13:11:37 UTC (rev 208)
+++ .git/logs/refs/heads/master	2014-05-13 13:13:38 UTC (rev 209)
@@ -90,3 +90,4 @@
 79c9a62cd0b934e0f252e2fb660c26ffeeeea825 cb2b4bc53aac68ec1b56532dbbded71b4eca7582 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1398692432 +0200	pull: Fast-forward
 cb2b4bc53aac68ec1b56532dbbded71b4eca7582 3bd7f01d1011acc7afac8a149cd922137804fd77 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399362996 +0200	commit: hotfix cy750K
 3bd7f01d1011acc7afac8a149cd922137804fd77 18800d736527a84881558f1f00ba4af0f62807fe Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399972601 +0200	pull: Fast-forward
+18800d736527a84881558f1f00ba4af0f62807fe 933655cc7d8def1beddb1f60ed576d1653ef8504 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399986792 +0200	pull: Fast-forward

Modified: .git/logs/refs/remotes/origin/master
===================================================================
--- .git/logs/refs/remotes/origin/master	2014-05-13 13:11:37 UTC (rev 208)
+++ .git/logs/refs/remotes/origin/master	2014-05-13 13:13:38 UTC (rev 209)
@@ -87,3 +87,4 @@
 79c9a62cd0b934e0f252e2fb660c26ffeeeea825 cb2b4bc53aac68ec1b56532dbbded71b4eca7582 Sebastian DiLorenzo <S_D at array-47-13.medsci.uu.se> 1398692432 +0200	pull: fast-forward
 cb2b4bc53aac68ec1b56532dbbded71b4eca7582 3bd7f01d1011acc7afac8a149cd922137804fd77 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1399363003 +0200	update by push
 3bd7f01d1011acc7afac8a149cd922137804fd77 18800d736527a84881558f1f00ba4af0f62807fe Sebastian DiLorenzo <S_D at array-47-13.medsci.uu.se> 1399972601 +0200	pull: fast-forward
+18800d736527a84881558f1f00ba4af0f62807fe 933655cc7d8def1beddb1f60ed576d1653ef8504 Sebastian DiLorenzo <S_D at array-47-13.medsci.uu.se> 1399986792 +0200	pull: fast-forward

Modified: .git/refs/heads/master
===================================================================
--- .git/refs/heads/master	2014-05-13 13:11:37 UTC (rev 208)
+++ .git/refs/heads/master	2014-05-13 13:13:38 UTC (rev 209)
@@ -1 +1 @@
-18800d736527a84881558f1f00ba4af0f62807fe
+933655cc7d8def1beddb1f60ed576d1653ef8504

Modified: .git/refs/remotes/origin/master
===================================================================
--- .git/refs/remotes/origin/master	2014-05-13 13:11:37 UTC (rev 208)
+++ .git/refs/remotes/origin/master	2014-05-13 13:13:38 UTC (rev 209)
@@ -1 +1 @@
-18800d736527a84881558f1f00ba4af0f62807fe
+933655cc7d8def1beddb1f60ed576d1653ef8504

Modified: pkg/TAPS/R/TAPS.r
===================================================================
--- pkg/TAPS/R/TAPS.r	2014-05-13 13:11:37 UTC (rev 208)
+++ pkg/TAPS/R/TAPS.r	2014-05-13 13:13:38 UTC (rev 209)
@@ -25,8 +25,8 @@
     suppressPackageStartupMessages(library(fields))
     suppressPackageStartupMessages(library(xlsx))    
     suppressPackageStartupMessages(library(foreach))
-    suppressPackageStartupMessages(library(doMC))
-    suppressPackageStartupMessages(registerDoMC(cores=cores))
+    try(suppressPackageStartupMessages(library(doMC)),silent=T)
+    try(suppressPackageStartupMessages(registerDoMC(cores=cores),silent=T)
 
 
     #list.of.packages <- c("stats", "fields")
@@ -263,8 +263,8 @@
     maxCn=12
     #suppressPackageStartupMessages(library(xlsx))    
     suppressPackageStartupMessages(library(foreach))
-    suppressPackageStartupMessages(library(doMC))
-    suppressPackageStartupMessages(registerDoMC(cores=cores))
+    try(suppressPackageStartupMessages(library(doMC)),silent=T)
+    try(suppressPackageStartupMessages(registerDoMC(cores=cores),silent=T)
     
     
     ## TAPS_call outputs the total and minor allele copy numbers of all segments as a text file, and as images for visual confirmation.