[Patchwork-commits] r176 - .git .git/logs .git/logs/refs/heads .git/logs/refs/remotes/origin .git/refs/heads .git/refs/remotes/origin pkg/TAPS/R www

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Wed Jun 19 11:09:56 CEST 2013


Author: sebastian_d
Date: 2013-06-19 11:09:55 +0200 (Wed, 19 Jun 2013)
New Revision: 176

Modified:
   .git/COMMIT_EDITMSG
   .git/index
   .git/logs/HEAD
   .git/logs/refs/heads/master
   .git/logs/refs/remotes/origin/master
   .git/refs/heads/master
   .git/refs/remotes/origin/master
   pkg/TAPS/R/TAPS.r
   www/TAPS_inst.php
Log:
Fix for library loading in TAPS

Modified: .git/COMMIT_EDITMSG
===================================================================
--- .git/COMMIT_EDITMSG	2013-06-18 14:42:45 UTC (rev 175)
+++ .git/COMMIT_EDITMSG	2013-06-19 09:09:55 UTC (rev 176)
@@ -1 +1 @@
-Substantial changes to homepage which now incudes TAPS tutorial as well as some changes to TAPS
+Fix for library loading in TAPS

Modified: .git/index
===================================================================
(Binary files differ)

Modified: .git/logs/HEAD
===================================================================
--- .git/logs/HEAD	2013-06-18 14:42:45 UTC (rev 175)
+++ .git/logs/HEAD	2013-06-19 09:09:55 UTC (rev 176)
@@ -47,3 +47,4 @@
 5eeba51632467a2cf6300bb53b26c98e0a03d735 b6c91dc80295b120969877f8e582708fb89038cc Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371462080 +0200	commit: some changes to TAPS
 b6c91dc80295b120969877f8e582708fb89038cc 532c860ab5cdbc3cbfd3537ef8fe60f35d4935de Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371462084 +0200	pull : Merge made by recursive.
 532c860ab5cdbc3cbfd3537ef8fe60f35d4935de 8fa9d868a51e8b4bdee100d16c6219d2541df0a6 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371566516 +0200	commit: Substantial changes to homepage which now incudes TAPS tutorial as well as some changes to TAPS
+8fa9d868a51e8b4bdee100d16c6219d2541df0a6 49637041dfcf47c07ecaa49251071ba4e2ad377a Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371633024 +0200	commit: Fix for library loading in TAPS

Modified: .git/logs/refs/heads/master
===================================================================
--- .git/logs/refs/heads/master	2013-06-18 14:42:45 UTC (rev 175)
+++ .git/logs/refs/heads/master	2013-06-19 09:09:55 UTC (rev 176)
@@ -47,3 +47,4 @@
 5eeba51632467a2cf6300bb53b26c98e0a03d735 b6c91dc80295b120969877f8e582708fb89038cc Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371462080 +0200	commit: some changes to TAPS
 b6c91dc80295b120969877f8e582708fb89038cc 532c860ab5cdbc3cbfd3537ef8fe60f35d4935de Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371462084 +0200	pull : Merge made by recursive.
 532c860ab5cdbc3cbfd3537ef8fe60f35d4935de 8fa9d868a51e8b4bdee100d16c6219d2541df0a6 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371566516 +0200	commit: Substantial changes to homepage which now incudes TAPS tutorial as well as some changes to TAPS
+8fa9d868a51e8b4bdee100d16c6219d2541df0a6 49637041dfcf47c07ecaa49251071ba4e2ad377a Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371633024 +0200	commit: Fix for library loading in TAPS

Modified: .git/logs/refs/remotes/origin/master
===================================================================
--- .git/logs/refs/remotes/origin/master	2013-06-18 14:42:45 UTC (rev 175)
+++ .git/logs/refs/remotes/origin/master	2013-06-19 09:09:55 UTC (rev 176)
@@ -45,3 +45,4 @@
 cb78a64920a2a019a496e6ec35bd383e34b3dff7 5eeba51632467a2cf6300bb53b26c98e0a03d735 Sebastian DiLorenzo <S_D at imv096.medsci.uu.se> 1371209333 +0200	pull : fast-forward
 5eeba51632467a2cf6300bb53b26c98e0a03d735 6eb4b7b50b8a1e1e97b2abc30404fa09d78e029e Sebastian DiLorenzo <S_D at imv096.medsci.uu.se> 1371461678 +0200	pull : fast-forward
 6eb4b7b50b8a1e1e97b2abc30404fa09d78e029e 8fa9d868a51e8b4bdee100d16c6219d2541df0a6 Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371566540 +0200	update by push
+8fa9d868a51e8b4bdee100d16c6219d2541df0a6 49637041dfcf47c07ecaa49251071ba4e2ad377a Sebastian DiLorenzo <dilorenzo.sebastian at gmail.com> 1371633040 +0200	update by push

Modified: .git/refs/heads/master
===================================================================
--- .git/refs/heads/master	2013-06-18 14:42:45 UTC (rev 175)
+++ .git/refs/heads/master	2013-06-19 09:09:55 UTC (rev 176)
@@ -1 +1 @@
-8fa9d868a51e8b4bdee100d16c6219d2541df0a6
+49637041dfcf47c07ecaa49251071ba4e2ad377a

Modified: .git/refs/remotes/origin/master
===================================================================
--- .git/refs/remotes/origin/master	2013-06-18 14:42:45 UTC (rev 175)
+++ .git/refs/remotes/origin/master	2013-06-19 09:09:55 UTC (rev 176)
@@ -1 +1 @@
-8fa9d868a51e8b4bdee100d16c6219d2541df0a6
+49637041dfcf47c07ecaa49251071ba4e2ad377a

Modified: pkg/TAPS/R/TAPS.r
===================================================================
--- pkg/TAPS/R/TAPS.r	2013-06-18 14:42:45 UTC (rev 175)
+++ pkg/TAPS/R/TAPS.r	2013-06-19 09:09:55 UTC (rev 176)
@@ -13,9 +13,9 @@
     #Load stats. It should be in all, at least semi-new, R distributions so we dont need to install.package it or
     #pre-install it
     #library(stats)
-    suppressPackageStartupMessages(library(stats,character.only=TRUE))
-    suppressPackageStartupMessages(library(DNAcopy,character.only=TRUE))
-    suppressPackageStartupMessages(library(fields,character.only=TRUE))
+    suppressPackageStartupMessages(library(stats))
+    suppressPackageStartupMessages(library(DNAcopy))
+    suppressPackageStartupMessages(library(fields))
 
 
     #list.of.packages <- c("stats", "fields")
@@ -57,7 +57,7 @@
         {
             ##read CYCHP file from ChAS with log-ratio info##
             ################################################
-            suppressPackageStartupMessages(library(affxparser,character.only=TRUE))
+            suppressPackageStartupMessages(library(affxparser))
             
             name=list.files(".",pattern="*.cychp")
             temp=readCcg(name)

Modified: www/TAPS_inst.php
===================================================================
--- www/TAPS_inst.php	2013-06-18 14:42:45 UTC (rev 175)
+++ www/TAPS_inst.php	2013-06-19 09:09:55 UTC (rev 176)
@@ -29,7 +29,7 @@
     install.packages("TAPS", repos="http://R-Forge.R-project.org",type="source")
 </pre>
 
-If something still does not work with installation, here are links to the location of the source files: <br />
+If something still does not work with installation, here is a link to the location of the source file: <br />
 
 <a href="http://r-forge.r-project.org/R/?group_id=1250" target="_blank" style="text-decoration:none;">
 	TAPS</a><br />
\ No newline at end of file



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