[Patchwork-commits] r54 - in pkg/patchworkData: . data inst inst/extdata man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Wed Dec 14 15:23:48 CET 2011
Author: sebastian_d
Date: 2011-12-14 15:23:48 +0100 (Wed, 14 Dec 2011)
New Revision: 54
Added:
pkg/patchworkData/inst/
pkg/patchworkData/inst/extdata/
pkg/patchworkData/inst/extdata/chr1.mark.rds
pkg/patchworkData/inst/extdata/chr10.mark.rds
pkg/patchworkData/inst/extdata/chr11.mark.rds
pkg/patchworkData/inst/extdata/chr12.mark.rds
pkg/patchworkData/inst/extdata/chr13.mark.rds
pkg/patchworkData/inst/extdata/chr14.mark.rds
pkg/patchworkData/inst/extdata/chr15.mark.rds
pkg/patchworkData/inst/extdata/chr16.mark.rds
pkg/patchworkData/inst/extdata/chr17.mark.rds
pkg/patchworkData/inst/extdata/chr18.mark.rds
pkg/patchworkData/inst/extdata/chr19.mark.rds
pkg/patchworkData/inst/extdata/chr2.mark.rds
pkg/patchworkData/inst/extdata/chr20.mark.rds
pkg/patchworkData/inst/extdata/chr21.mark.rds
pkg/patchworkData/inst/extdata/chr22.mark.rds
pkg/patchworkData/inst/extdata/chr3.mark.rds
pkg/patchworkData/inst/extdata/chr4.mark.rds
pkg/patchworkData/inst/extdata/chr5.mark.rds
pkg/patchworkData/inst/extdata/chr6.mark.rds
pkg/patchworkData/inst/extdata/chr7.mark.rds
pkg/patchworkData/inst/extdata/chr8.mark.rds
pkg/patchworkData/inst/extdata/chr9.mark.rds
pkg/patchworkData/inst/extdata/chrX.mark.rds
pkg/patchworkData/inst/extdata/chrY.mark.rds
Removed:
pkg/patchworkData/data/chr1.mark.rds
pkg/patchworkData/data/chr10.mark.rds
pkg/patchworkData/data/chr11.mark.rds
pkg/patchworkData/data/chr12.mark.rds
pkg/patchworkData/data/chr13.mark.rds
pkg/patchworkData/data/chr14.mark.rds
pkg/patchworkData/data/chr15.mark.rds
pkg/patchworkData/data/chr16.mark.rds
pkg/patchworkData/data/chr17.mark.rds
pkg/patchworkData/data/chr18.mark.rds
pkg/patchworkData/data/chr19.mark.rds
pkg/patchworkData/data/chr2.mark.rds
pkg/patchworkData/data/chr20.mark.rds
pkg/patchworkData/data/chr21.mark.rds
pkg/patchworkData/data/chr22.mark.rds
pkg/patchworkData/data/chr3.mark.rds
pkg/patchworkData/data/chr4.mark.rds
pkg/patchworkData/data/chr5.mark.rds
pkg/patchworkData/data/chr6.mark.rds
pkg/patchworkData/data/chr7.mark.rds
pkg/patchworkData/data/chr8.mark.rds
pkg/patchworkData/data/chr9.mark.rds
pkg/patchworkData/data/chrX.mark.rds
pkg/patchworkData/data/chrY.mark.rds
pkg/patchworkData/man/chr1.mark.Rd
pkg/patchworkData/man/chr10.mark.Rd
pkg/patchworkData/man/chr11.mark.Rd
pkg/patchworkData/man/chr12.mark.Rd
pkg/patchworkData/man/chr13.mark.Rd
pkg/patchworkData/man/chr14.mark.Rd
pkg/patchworkData/man/chr15.mark.Rd
pkg/patchworkData/man/chr17.mark.Rd
pkg/patchworkData/man/chr18.mark.Rd
pkg/patchworkData/man/chr19.mark.Rd
pkg/patchworkData/man/chr2.mark.Rd
pkg/patchworkData/man/chr20.mark.Rd
pkg/patchworkData/man/chr21.mark.Rd
pkg/patchworkData/man/chr22.mark.Rd
pkg/patchworkData/man/chr3.mark.Rd
pkg/patchworkData/man/chr4.mark.Rd
pkg/patchworkData/man/chr5.mark.Rd
pkg/patchworkData/man/chr6.mark.Rd
pkg/patchworkData/man/chr7.mark.Rd
pkg/patchworkData/man/chr8.mark.Rd
pkg/patchworkData/man/chr9.mark.Rd
pkg/patchworkData/man/chrX.mark.Rd
pkg/patchworkData/man/chrY.mark.Rd
Log:
changing location of rds as they cant be in data for some reason. what to do with documentation?
Deleted: pkg/patchworkData/data/chr1.mark.rds
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Deleted: pkg/patchworkData/data/chr10.mark.rds
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Deleted: pkg/patchworkData/data/chr11.mark.rds
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Deleted: pkg/patchworkData/data/chr12.mark.rds
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Deleted: pkg/patchworkData/data/chr13.mark.rds
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Deleted: pkg/patchworkData/data/chr14.mark.rds
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Deleted: pkg/patchworkData/data/chr15.mark.rds
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Deleted: pkg/patchworkData/data/chr16.mark.rds
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Deleted: pkg/patchworkData/data/chr17.mark.rds
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Deleted: pkg/patchworkData/data/chr18.mark.rds
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Deleted: pkg/patchworkData/data/chr19.mark.rds
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Deleted: pkg/patchworkData/data/chr2.mark.rds
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Deleted: pkg/patchworkData/data/chr20.mark.rds
===================================================================
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Deleted: pkg/patchworkData/data/chr21.mark.rds
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Deleted: pkg/patchworkData/data/chr22.mark.rds
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Deleted: pkg/patchworkData/data/chr3.mark.rds
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Deleted: pkg/patchworkData/data/chr4.mark.rds
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Deleted: pkg/patchworkData/data/chr5.mark.rds
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Deleted: pkg/patchworkData/data/chr6.mark.rds
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(Binary files differ)
Deleted: pkg/patchworkData/data/chr7.mark.rds
===================================================================
(Binary files differ)
Deleted: pkg/patchworkData/data/chr8.mark.rds
===================================================================
(Binary files differ)
Deleted: pkg/patchworkData/data/chr9.mark.rds
===================================================================
(Binary files differ)
Deleted: pkg/patchworkData/data/chrX.mark.rds
===================================================================
(Binary files differ)
Deleted: pkg/patchworkData/data/chrY.mark.rds
===================================================================
(Binary files differ)
Added: pkg/patchworkData/inst/extdata/chr1.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr1.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr10.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr10.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr11.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr11.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr12.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr12.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr13.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr13.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr14.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr14.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr15.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr15.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr16.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr16.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr17.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr17.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr18.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr18.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr19.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr19.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr2.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr2.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr20.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr20.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr21.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr21.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr22.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr22.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr3.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr3.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr4.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr4.mark.rds
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Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr5.mark.rds
===================================================================
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Property changes on: pkg/patchworkData/inst/extdata/chr5.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr6.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr6.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr7.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr7.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr8.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr8.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chr9.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chr9.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chrX.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chrX.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: pkg/patchworkData/inst/extdata/chrY.mark.rds
===================================================================
(Binary files differ)
Property changes on: pkg/patchworkData/inst/extdata/chrY.mark.rds
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Deleted: pkg/patchworkData/man/chr1.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr1.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr1.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr1.mark}
-\alias{chr1.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 1.
-}
-
-\description{
-GC content data for chromosome 1.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr1.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
Deleted: pkg/patchworkData/man/chr10.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr10.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr10.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr10.mark}
-\alias{chr10.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 10.
-}
-
-\description{
-GC content data for chromosome 10.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr10.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr11.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr11.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr11.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr11.mark}
-\alias{chr11.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 11.
-}
-
-\description{
-GC content data for chromosome 11.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr11.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr12.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr12.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr12.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr12.mark}
-\alias{chr12.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 12.
-}
-
-\description{
-GC content data for chromosome 12.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr12.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr13.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr13.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr13.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr13.mark}
-\alias{chr13.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 13.
-}
-
-\description{
-GC content data for chromosome 13.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr13.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr14.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr14.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr14.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr14.mark}
-\alias{chr14.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 14.
-}
-
-\description{
-GC content data for chromosome 14.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr14.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr15.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr15.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr15.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr15.mark}
-\alias{chr15.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 15.
-}
-
-\description{
-GC content data for chromosome 15.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr15.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr17.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr17.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr17.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr17.mark}
-\alias{chr17.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 17.
-}
-
-\description{
-GC content data for chromosome 17.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr17.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr18.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr18.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr18.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr18.mark}
-\alias{chr18.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 18.
-}
-
-\description{
-GC content data for chromosome 18.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr18.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr19.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr19.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr19.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr19.mark}
-\alias{chr19.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 19.
-}
-
-\description{
-GC content data for chromosome 19.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr19.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr2.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr2.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr2.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr2.mark}
-\alias{chr2.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 2.
-}
-
-\description{
-GC content data for chromosome 2.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr2.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr20.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr20.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr20.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr20.mark}
-\alias{chr20.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 20.
-}
-
-\description{
-GC content data for chromosome 20.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr20.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr21.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr21.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr21.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr21.mark}
-\alias{chr21.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 21.
-}
-
-\description{
-GC content data for chromosome 21.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr21.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr22.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr22.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr22.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr22.mark}
-\alias{chr22.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 22.
-}
-
-\description{
-GC content data for chromosome 22.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr22.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr3.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr3.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr3.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr3.mark}
-\alias{chr3.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 3.
-}
-
-\description{
-GC content data for chromosome 3.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr3.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr4.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr4.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr4.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr4.mark}
-\alias{chr4.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 4.
-}
-
-\description{
-GC content data for chromosome 4.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr4.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr5.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr5.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr5.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr5.mark}
-\alias{chr5.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 5.
-}
-
-\description{
-GC content data for chromosome 5.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr5.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr6.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr6.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr6.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr6.mark}
-\alias{chr6.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 6.
-}
-
-\description{
-GC content data for chromosome 6.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr6.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr7.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr7.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr7.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr7.mark}
-\alias{chr7.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 7.
-}
-
-\description{
-GC content data for chromosome 7.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr7.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr8.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr8.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr8.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr8.mark}
-\alias{chr8.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 8.
-}
-
-\description{
-GC content data for chromosome 8.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr8.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chr9.mark.Rd
===================================================================
--- pkg/patchworkData/man/chr9.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chr9.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chr9.mark}
-\alias{chr9.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome 9.
-}
-
-\description{
-GC content data for chromosome 9.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chr9.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
-\keyword{datasets}
\ No newline at end of file
Deleted: pkg/patchworkData/man/chrX.mark.Rd
===================================================================
--- pkg/patchworkData/man/chrX.mark.Rd 2011-12-14 14:02:44 UTC (rev 53)
+++ pkg/patchworkData/man/chrX.mark.Rd 2011-12-14 14:23:48 UTC (rev 54)
@@ -1,42 +0,0 @@
-\name{chrX.mark}
-\alias{chrX.mark}
-\docType{data}
-
-\title{
-GC content data for chromosome X.
-}
-
-\description{
-GC content data for chromosome X.
-Loaded during patchwork.readChroms.
-}
-
-
-\usage{chrX.mark}
-
-\format{
- A data frame with the following 4 variables.
- \describe{
- \item{pos}{position on chromosome}
- \item{gc250}{gc content in a 250 base window}
- \item{gc1000}{gc content in a 1000 base window}
- \item{gcMb}{gc content in a one million base window (not in use)}
- }
-}
-
-\details{
-gcMb is not in use at the moment.
-}
-
-%\source{
-% \url{http://www.}
-%}
-
-\seealso{
- The function \code{\link[patchwork]{patchwork.readChroms}} uses this data.
-}
-
-%\examples{
-%}
-
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/patchwork -r 54
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