[NMF-user] Loading NMF fails when in a container
Roel Janssen
roel at gnu.org
Wed Nov 30 14:39:28 CET 2016
Hello there.
First of all, thanks for creating this package. It's really useful.
I've been trying to confine run-time environments in a container (so the
program only has access to a subset of the operating system).
When loading NMF from inside a container, it fails and I don't know what
I'm missing. Here's the output from inside the container:
---------------------------------- BEGIN ----------------------------------
user at container ~# R
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-unknown-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(NMF)
Loading required package: pkgmaker
Loading required package: registry
Attaching package: 'pkgmaker'
The following object is masked from 'package:base':
isNamespaceLoaded
Loading required package: rngtools
Loading required package: cluster
sh: wc: command not found
Error : .onAttach failed in attachNamespace() for 'NMF', details:
call: if (n > 2) n <- n - 1L
error: missing value where TRUE/FALSE needed
Error: package or namespace load failed for 'NMF'
>
----------------------------------- END -----------------------------------
I couldn't find 'if (n > 2) n <- n - 1L' in the source code, so I am
clueless on what goes wrong here.
Any ideas?
Kind regards,
Roel Janssen
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