[NMF-user] [ANN] NMF version 0.9 pre-release - install error - built a Mac binary
Gordon Robertson
grobertson at bcgsc.ca
Mon Nov 12 19:00:54 CET 2012
Renaud
I ran the commands, in RStudio, on OS X 10.7.5, on the system with which I built the binary yesterday.
> dir.create(f <- tempfile())
> install.packages('NMF',
+ repos=c('http://web.cbio.uct.ac.za/~renaud/CRAN', getOption('repos')),
+ lib=f)
package ‘NMF’ is available as a source package but not as a binary
Warning in install.packages :
package ‘NMF’ is not available (for R version 2.15.2)
> unlink(f, recursive=TRUE)
> sessionInfo()
R version 2.15.2 (2012-10-26)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tools_2.15.2
Gordon
On 2012-11-12, at 1:28 AM, Renaud Gaujoux wrote:
Hi,
thank you Gordon for building the binary package for Mac. It should now
be available from the repository. Could you please try the following and
let me know how it goes?
Thanks.
Renaud
##########
# create temporary library not to overwrite your previous NMF installation
dir.create(f <- tempfile())
# install
install.packages('NMF',
repos=c('http://web.cbio.uct.ac.za/~renaud/CRAN', getOption('repos')),
lib=f)
# clean up
unlink(f, recursive=TRUE)
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