[genoPlotR-help] adding contigs to the gene comparison

[Ezgi Özcan]

Hi,

I am using genoplotR to plot arrow comparisons for four genomes. One is
type strain complete sequence and the other 3 are draft genomes, therefore,
they are in contigs. The genes of interest reside in different contigs in
my draft genomes. Here is an example for one of the genomes below. As you
can see some genes are overlapping positions if we dont consider the
contigs. Can you help me how to add contigs into my figures? I have also
attached a comparison map to the type strain. Thank you for your help,

UCD301
start end position contig
977 1999 + 37
3 908 + 37
5743 6337 + 32
4614 5693 + 32
2332 4587 + 32
1162 2112 + 32
191 1162 + 32
441 1757 + 311
Ezgi Özcan
Post-Doctoral Researcher
University of Massachusetts Amherst
selalab.org
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