[GenABEL-dev] automake

[Frank, Alvaro Jesus]

Thank you for the info. My problems with this custom compiled libraries seem to be hard to solve once a normal shared one is installed. blas has to be compiled with OPENMP=1 enabled and default binaries  for Ubuntu seem not to have them. I will try your suggestion and will follow up soon too.
________________________________________
From: genabel-devel-bounces at lists.r-forge.r-project.org [genabel-devel-bounces at lists.r-forge.r-project.org] on behalf of L.C. Karssen [lennart at karssen.org]
Sent: Monday, May 19, 2014 6:38 PM
To: genabel-devel at lists.r-forge.r-project.org
Subject: Re: [GenABEL-dev] automake

Hi Alvaro,

I just realised that my previous answer may not be what you were looking
for.
The LD_LIBRARY_PATH variable is used to search for shared libraries at
run time. Instead you probably mean how to tell where the libraries is
at compile time. For that you should add the CXXFLAGS option -L followed
by the path.


Best,

Lennart.

On 15-05-14 20:03, L.C. Karssen wrote:
> Hi Alvaro,
>
> On 15-05-14 17:01, Frank, Alvaro Jesus wrote:
>> Hi Lennart,
>>
>> I need some help with making the installation of omicabelnomm with
>> ubuntu and similar systems possible for end users. Aparently some
>> pre-compiled blas do not get compiled with support for openmp. After
>> compiling an openblas i wish to keep using the automake path of
>> installation.
>
> I don't think I understand you: what exactly do you mean with "the
> automake path of installation"?
>
>> But I m having problems having automake to grab the new
>> blas library.
>
> Normally you would set the LD_LIBRARY_PATH environment variable if you
> want to point to a new (shared) library. Would that solve your problem
> as well?
>
>
> Lennart.
>
>>
>> Anyone aware of how to do this?
>>
>> -Alvaro
>>
>>
>> _______________________________________________
>> genabel-devel mailing list
>> genabel-devel at lists.r-forge.r-project.org
>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel
>>
>
>
>
> _______________________________________________
> genabel-devel mailing list
> genabel-devel at lists.r-forge.r-project.org
> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel
>

--
*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
L.C. Karssen
Utrecht
The Netherlands

lennart at karssen.org
http://blog.karssen.org
GPG key ID: A88F554A
-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-