[GenABEL-dev] Abstract for the EMGM 2014 conference
L.C. Karssen
lennart at karssen.org
Thu Jan 30 20:39:20 CET 2014
Good point! :-)
I've got several options:
1) The State of the GenABEL Project
2) The GenABEL project: improvements and additions
3) New software and developments in the GenABEL project
4) GenABEL: implementing statistical genetics in software
Any other suggestions?
I'm a bit concerned that it may be too software-developement oriented
for a statistical genetics meeting. We'll see
On 30-01-14 20:31, Yury Aulchenko wrote:
> What is the title?
>
> ----------------
> Sent from mobile device, please excuse possible typos
>
>> On 30 Jan 2014, at 20:28, "L.C. Karssen" <lennart at karssen.org> wrote:
>>
>> Dear list,
>>
>> I'm planning to go to the EMGM (European Mathematical Genetics Meeting)
>> in Cologne in April. I'd like to present a poster there and wrote the
>> abstract below.
>> Please let me know any comments or suggestions as soon possible as the
>> deadline for abstract submission is tomorrow (Fri 31 Jan).
>>
>> Thank you very much,
>>
>> Lennart.
>>
>>
>> --------------8<----------------8<------------------8<-------------
>> Over the last year the GenABEL project has seen a considerable
>> number of improvements. These improvements do not only consist of
>> updates to the existing packages of the GenABEL suite, but are also
>> manifest in the way the development process is being handled and
>> the way the packages are made available to the users.
>>
>> On our poster we will demonstrate the newly implemented features in
>> the various packages of the GenABEL suite. We also welcome a new
>> member to the GenABEL family: OmicABEL, a package for rapid
>> mixed-model based genome-wide association analysis of multiple
>> traits (think metabolomics, glycomics, etc.).
>>
>> Recently we started using the open source Jenkins Continuous
>> Integration server to help us release software of higher
>> quality. Jenkins is a framework that automatically runs several
>> tests (e.g. static code analysis, checks for memory leaks) for each
>> of our packages. It builds and tests each project after a new commit
>> in our version control system. This allows us to detect problems in
>> the code at an early stage, before they bug the user.
>>
>> After the GenABEL package, ProbABEL is the second package that is
>> available as a Debian package. This means that users of upcoming
>> Debian releases will be able to install ProbABEL with a simple click
>> of a button or a single command. Moreover, since many other Linux
>> distributions like Ubuntu and Linux Mint are derived from Debian,
>> users of these distributions automatically benefit as well.
>>
>> In the coming year more packages are expected to be added the
>> GenABEL suite as well as continued efforts to improve the existing
>> ones. Moreover, we plan to increase both the ease of installation as
>> well as the visibility of the GenABEL suite by adding more packages
>> into both the Debian and Red Hat Enterprise Linux repositories (as
>> well as derivatives like CentOS and Scientific Linux).
>> --------------8<----------------8<------------------8<-------------
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> --
>> *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
>> L.C. Karssen
>> Utrecht
>> The Netherlands
>>
>> lennart at karssen.org
>> http://blog.karssen.org
>> GPG key ID: A88F554A
>> -*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-
>>
>> _______________________________________________
>> genabel-devel mailing list
>> genabel-devel at lists.r-forge.r-project.org
>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel
--
*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
L.C. Karssen
Utrecht
The Netherlands
lennart at karssen.org
http://blog.karssen.org
GPG key ID: A88F554A
-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-
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