[GenABEL-dev] GenABEL tutorials to SVN

L.C. Karssen lennart at karssen.org
Sun Mar 10 23:24:23 CET 2013


Dear all,

On 08-03-13 09:37, Yurii Aulchenko wrote:
> Here is another question: for the tutorials we need relative large data
> sets (as text files or in RData or other binary format).

Good question, I hadn't thought of that yet.

> 
> On one hand, it is handy to have "all in"; on the other hand - why
> putting files which are either binary and/or not likely to change to
> SVN? - this is not logical.

True. Having binary data in SVN is not ideal. On the other hand, a
definition of what goes into a revision control system is: all the files
that cannot be created by other files. From that point of view having
the data sets in SVN isn't a problem and it does give us the benefit of
the "all in" system.

> 
> The only thing I can think of is to put data files to some server and
> then as the first part of the tutorial to "pull" it e.g. using wget.
> Does affect cross-platform compatibility though... Also, where we put
> the files? - Drupal? - if we have say 100 Megs in data, would it
> generate too much traffic so the bill becomes somewhat sensible?

We could try that. We still have quite some room on our server account:
space and network bandwith are > 90% unused.

> 
> I am really not sure what to do in this respect. 


All in all, I think we should have the data in SVN. We don't want to
make building the documentation too hard. Working around the non-free
data will be hard enough work.
I tried to find out if there is a maximum of storage on the R-forge SVN
server, but I couldn't find an answer.


Lennart.

> 
> Yurii
> 
> On Fri, Mar 8, 2013 at 9:30 AM, Yurii Aulchenko
> <yurii.aulchenko at gmail.com <mailto:yurii.aulchenko at gmail.com>> wrote:
> 
>     Ok, great, I think this is the way to go.
> 
>     Will make an account of private/public files, will push things to
>     SVN (hopefully some time next week), and see what we can do :)
> 
>     best wishes,
>     Yurii
> 
> 

-- 
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L.C. Karssen
Utrecht
The Netherlands

lennart at karssen.org
http://blog.karssen.org

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