[GenABEL-dev] new GenA submision

Yury Aulchenko yurii.aulchenko at gmail.com
Mon Dec 23 19:22:23 CET 2013


Done. I got

* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building ‘GenABEL_1.8-0.tar.gz’

The distributive of GenABEL is in GenABEL_version_for_submission/GenABEL_DISTRIBUTIVE_IS_HERE directory. Check out that there were no errors/warnings during running this script.
GenABEL building DONE!

The NOTE was

* checking foreign function calls ... NOTE
Foreign function call with ?~@~XPACKAGE?~@~Y argument in a different package:
  .Call("iterator", ..., PACKAGE = "DatABEL")
See the chapter ?~@~XSystem and foreign language interfaces?~@~Y of the
?~@~XWriting R Extensions?~@~Y manual.



On Dec 23, 2013, at 13:02 PM, Maksim Struchalin <m.v.struchalin at mail.ru> wrote:

> Yes. Just run the 'GenABEL-general/scripts/makedistrib_GenABEL.sh' script from any dir. It will make a 'GenABEL_version_for_submission' directory, download and build everything there. The GenABEL distributive will be in 'GenABEL_version_for_submission/GenABEL_DISTRIBUTIVE_IS_HERE' dir. After the script is done, plz, check out the file GenABEL_version_for_submission/GenABEL.Rcheck/00check.log for possible WARNINGs NOTEs.
> 
> thanks,
> Maksim
> 
> On 23/12/2013 18:47, Yurii Aulchenko wrote:
>> I can run Mac tests
>> 
>> Should I use the makedistrib... on SVN to do it?
>> 
>> Yurii
>> 
>> On Monday, December 23, 2013, Maksim Struchalin wrote:
>> Hi Yurii,
>> 
>> I have considered the comments on GenABEL from CRAN after the last submission:
>> 
>> 1) Fixed warnings from 'clang' compiler
>> 2) Compressed the GenABEL tutorial down to 2.3Mb.
>> 3) Changed the tutorial.
>> 4) About itearator: By now, I can write an R function as CRAN suggested but it will take some time. I propose use GenABEL's iterator for this submission as it was before and make all the changes later.
>> 
>> I did not test GenABEL on Mac and win. Could someone do it? If these tests will pass ok, I can submit the GenABEL.
>> 
>> best,
>> Maksim
>> 
>> 
>> -- 
>> -----------------------------------------------------
>> Yurii S. Aulchenko
>> 
>> [ LinkedIn ] [ Twitter ] [ Blog ]
>> 
> 

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