[GenABEL-dev] The GenABEL suite and AutoMM

[Yurii Aulchenko]

> That sounds like a great opportunity! This can maybe help us out with
> the lipidomics data we have in our group, and maybe later also with
> results from expression studies...
>
>
Yes, this is the idea :)


> Could you already share some details about AutoMM? Which programming
> language was used (C/C++ I assume)? Which (af any) dependencies does it
> have? Any idea as to when we can expect to see AutoMM "in person"?
>
>
Yes, this is C/C++; as for dependancies I am not 100% sure yet (all coding
job was done by Diego), but the idea from the start was that it should be
reasonably portable and should be installable (at least by Academia)
without any extra costs.

As for seeing 'in person' - as soon as we submit the manuscript (or just
before the submission).

Something that also comes to mind is how are we going to integrate
> AutoMM into the family? For example, in terms of input and output file
> formats, options (option names) etc.
>

It now operated on DatABEL/filevector formatted files, though much can be
done yet.


>
> As to the license, I'm glad to see that an open source license was
> chosen for the project!
>
>
Me too :)

best wishes,
Yurii
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/genabel-devel/attachments/20121205/2a67fa91/attachment.html>