[GenABEL-dev] updated GenABEL_1.6-5 on CRAN

Kurt Hornik Kurt.Hornik at wu.ac.at
Mon Feb 7 18:01:52 CET 2011


>>>>> Yurii Aulchenko writes:

> Dear Kurt,
> sorry for delay -- but now I think we have fixed the problem

> updated version uploaded to CRAN ftp

Thanks.  I now get

* checking whether package ‘GenABEL’ can be installed ... WARNING
Found the following significant warnings:
  gwaa_cpp.cpp:123: warning: ISO C++ forbids variable length array ‘gt’
  iterator_functions.cpp:106: warning: ISO C++ forbids variable length array ‘totg’
  iterator_functions.cpp:106: warning: ISO C++ forbids variable length array ‘x2’
  iterator_functions.cpp:106: warning: ISO C++ forbids variable length array ‘sumx’
  iterator_functions.cpp:107: warning: ISO C++ forbids variable length array ‘sg0’
  iterator_functions.cpp:107: warning: ISO C++ forbids variable length array ‘sg1’
  iterator_functions.cpp:107: warning: ISO C++ forbids variable length array ‘sg2’
  iterator_functions.cpp:107: warning: ISO C++ forbids variable length array ‘xg0’
  iterator_functions.cpp:107: warning: ISO C++ forbids variable length array ‘xg1’
  iterator_functions.cpp:107: warning: ISO C++ forbids variable length array ‘xg2’
  iterator_functions.cpp:157: warning: ‘igt’ is used uninitialized in this function

Can you pls fix these too?

Best
-k

> Yurii

> On Fri, Jan 28, 2011 at 7:08 PM, Kurt Hornik <Kurt.Hornik at wu.ac.at> wrote:
>>>>>>> Yurii Aulchenko writes:
>> 
>>> Dear Kurt,
>>> I have uploaded updated GenABEL_1.6-5 on CRAN ftp. Hope it will pass
>>> all checks well!
>> 
>> Thanks.  Actually, I get
>> 
>> g++-4.4 -I/home/Hornik/tmp/R/include  -I/usr/local/include   -DCOMPILE_WITH_R -fpic  -g -O2 -Wall -pedantic -c iterator.cpp -o iterator.o
>> iterator.cpp: In function ‘SEXPREC* iteratorGA(SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, ...)’:
>> iterator.cpp:249: error: ‘va_start’ was not declared in this scope
>> iterator.cpp:251: error: expected primary-expression before ‘)’ token
>> iterator.cpp:251: error: ‘va_arg’ was not declared in this scope
>> iterator.cpp:253: error: ‘va_end’ was not declared in this scope
>> make: *** [iterator.o] Error 1
>> 
>> Can u pls fix?
>> 
>> Best
>> -k
>> 
>>> with best wishes,
>>> Yurii
>> 
>> 
>> 



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