[GenABEL-dev] ProbABEL question

Yurii Aulchenko yurii.aulchenko at gmail.com
Wed Nov 17 22:09:34 CET 2010


thanks for trying this out!

we should probably list this dash-issue as a bug...

Yurii

On Wed, Nov 17, 2010 at 5:03 PM, Lorna Lopez <lorna.lopez at ed.ac.uk> wrote:
> Dear Yurii,
> Thanks for replying. I removed all the dashes and it worked! so no more
> problems. I should of sent you an email sooner.
> Thanks again,
> Lorna
>
>
>
> Yurii S. Aulchenko wrote:
>>>
>>> working wonderfully for one cohort that I am analysing. However, I have a
>>> problem with another set of files from a different cohort where I get this
>>> error message
>>>
>>> ".phenofile and dosefile did not match at line 4 (\ufffdB != 330-D003)"
>>>
>>> The only difference that I can see between my files that are working and
>>> those that aren't is the presence of a "-" in the id number. Do you think
>>> this can cause a problem? Is there something in the code that does something
>>> to id's with a dash in them? The ids are the same in the mldose file. I
>>> can't find anything else and I have read your manual over and over again.
>>
>> Potentially, yes. Can you remove the '-' and try if then it works all
>> right? Would be great if you let us know!
>>
>> Yurii
>>
>
>
> Lorna M. López (née Houlihan), PhD
> Research Fellow
> Centre for Cognitive Ageing and Cognitive Epidemiology
> Department of Psychology
> The University of Edinburgh
> 7 George Square
> Edinburgh
> EH8 9JZ
>
> Email: lorna.lopez at ed.ac.uk
> Tel: 0131 650 8495
>
> http://www.ppls.ed.ac.uk/people/lorna-m-lopez-nee-houlihan
> http://www.ccace.ed.ac.uk/
>
> --
> The University of Edinburgh is a charitable body, registered in
> Scotland, with registration number SC005336.
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