[GenABEL-dev] [Genabel-commits] r617 - in pkg: . VariABEL VariABEL/R VariABEL/man VariABEL/src

[Yurii Aulchenko]

Hi Maksim,

few notes on your recent commit

> ===================================================================
> --- pkg/VariABEL/DESCRIPTION                            (rev 0)
> +++ pkg/VariABEL/DESCRIPTION    2010-11-09 15:28:55 UTC (rev 617)
> @@ -0,0 +1,13 @@
> +Package: VarABEL

should that be VariABEL instead????

> +Type: Package
> +Title: genome-wide SNP association analysis

something like 'genome-wide variance heterogeneity analysis'?

> +Version: 1.5-0
> +Date: 2010-02-18
> +Author: Yurii Aulchenko, Maksim Struchalin

Thanks for that... but put your name first

> +Maintainer: Yurii Aulchenko <i.aoultchenko at erasmusmc.nl>

he-he... your name here, I believe

> +Depends: R (>= 2.4.0), methods, MASS

Use latest R 2.11.0?

> +Suggests: qvalue, genetics, haplo.stats, DatABEL

should that not suggest GenABEL as well?

> +Description: a package for genome-wide association analysis between
> +             quantitative or binary traits and single-nucleiotide
> +             polymorphisms (SNPs).

again, tell this is VARIANCE analysis

> +export(
> +       var.meta.gwaa,
> +       var.test.gwaa
> +       )

interesting. What do you want to keep only these 2 function interfaces
and all analyses are specified by options?


> +#    Description:  Function for meta analysis ov variance. Read flat files in plink format and perform metanalysis.

... analysis OF variance


cheers!

Yurii