[Genabel-commits] r2093 - pkg/MetABEL

[noreply at r-forge.r-project.org]

Author: lckarssen
Date: 2022-05-12 10:06:09 +0200 (Thu, 12 May 2022)
New Revision: 2093

Modified:
   pkg/MetABEL/DESCRIPTION
   pkg/MetABEL/NAMESPACE
Log:
Fix MetABEL CRAN check errors

This commit fixes the following errors that were reported by CRAN's
package checks:
- In the DESCRIPTION file:
  - Remove GenABEL from the Suggests lists because it is not available
    on CRAN any more.
  - Fix Description field to make it a complete sentence
  - Use capital case for the Title field
- In the NAMESPACE file:
  - Add 'importFrom' statements for several external functions used in
    MetABEL.

Kurt Hornik asked for these to be fixed, otherwise MetABEL would be
removed from CRAN.

This also updates the package version from 0.2-0 to 0.2-1.





Modified: pkg/MetABEL/DESCRIPTION
===================================================================
--- pkg/MetABEL/DESCRIPTION	2022-01-19 17:45:59 UTC (rev 2092)
+++ pkg/MetABEL/DESCRIPTION	2022-05-12 08:06:09 UTC (rev 2093)
@@ -1,14 +1,13 @@
 Package: MetABEL
 Type: Package
-Title: Meta-analysis of genome-wide SNP association results
-Version: 0.2-0
-Date: 2013-01-26
+Title: Meta-Analysis of Genome-Wide SNP Association Results
+Version: 0.2-1
+Date: 2022-05-12
 Author: Maksim Struchalin, Yurii Aulchenko
 Maintainer: L.C. Karssen <lennart at karssen.org>
 Depends:
     R (>= 2.5.1)
 Suggests:
-    GenABEL
-Description: A package for meta-analysis of genome-wide association
-    scans between quantitative or binary traits and SNPs
+Description: Provides functions for meta-analysis of genome-wide association
+    scans between quantitative or binary traits and SNPs.
 License: GPL (>= 2)

Modified: pkg/MetABEL/NAMESPACE
===================================================================
--- pkg/MetABEL/NAMESPACE	2022-01-19 17:45:59 UTC (rev 2092)
+++ pkg/MetABEL/NAMESPACE	2022-05-12 08:06:09 UTC (rev 2093)
@@ -1,3 +1,6 @@
 export(forestplot)
 export(metagwa.files)
 export(metagwa.tables)
+importFrom("graphics", "points", "text")
+importFrom("stats", "median", "pchisq", "qchisq", "qnorm")
+importFrom("utils", "read.csv", "write.csv")