[Genabel-commits] r1987 - in branches/ProbABEL-v0.4.4-hotfix/ProbABEL: . doc

[noreply at r-forge.r-project.org]

Author: lckarssen
Date: 2015-05-26 18:04:12 +0200 (Tue, 26 May 2015)
New Revision: 1987

Modified:
   branches/ProbABEL-v0.4.4-hotfix/ProbABEL/configure.ac
   branches/ProbABEL-v0.4.4-hotfix/ProbABEL/doc/ChangeLog
Log:
Push ProbABEL version number in the v0.4.4 hotfix branch to v0.4.5. Also update the Changelog for this release.


Modified: branches/ProbABEL-v0.4.4-hotfix/ProbABEL/configure.ac
===================================================================
--- branches/ProbABEL-v0.4.4-hotfix/ProbABEL/configure.ac	2015-05-26 15:57:11 UTC (rev 1986)
+++ branches/ProbABEL-v0.4.4-hotfix/ProbABEL/configure.ac	2015-05-26 16:04:12 UTC (rev 1987)
@@ -2,7 +2,7 @@
 # Process this file with autoconf to produce a configure script.
 
 AC_PREREQ([2.67])
-AC_INIT(ProbABEL, 0.4.4, genabel-devel at r-forge.wu-wien.ac.at)
+AC_INIT(ProbABEL, 0.4.5, genabel-devel at r-forge.wu-wien.ac.at)
 AM_INIT_AUTOMAKE([silent-rules subdir-objects])
 AM_SILENT_RULES([yes])
 AC_CONFIG_SRCDIR([src/data.h])

Modified: branches/ProbABEL-v0.4.4-hotfix/ProbABEL/doc/ChangeLog
===================================================================
--- branches/ProbABEL-v0.4.4-hotfix/ProbABEL/doc/ChangeLog	2015-05-26 15:57:11 UTC (rev 1986)
+++ branches/ProbABEL-v0.4.4-hotfix/ProbABEL/doc/ChangeLog	2015-05-26 16:04:12 UTC (rev 1987)
@@ -1,7 +1,21 @@
-***** v.0.4.5 (2015)
+***** v.0.4.5 (2015.05.26)
 * Fixed bug #6054: "Not all ProbABEL's short command line options are
   correctly parsed."
-* Minor fix to the manual: the Rsq values in the info file should be > 1e-16 otherwise the output will be set to 'nan'.
+* Fixed bug #6041: "ProbABEL's Cox module reports too many errors (beta
+  may be infinite, setting beta and se to 'NaN')". Thanks to Anne
+  Grotenhuis from the Radboud Medical Centre Nijmegen and forum user
+  quentin300 for their extensive bug reports and help in testing the fix.
+* Fixed bug #1266: "pacoxph with no covariates"; ProbABEL now also works
+  when no covariates have been provided. Thanks to Aaron Joon for
+  reporting this bug back in 2011 and to Anne Grotenhuis and to forum user
+  quentin300 for pushing this bug to my attention and their help in beta
+  testing.
+* pacoxph now displays the regression equation correctly.
+* Minor fix to the manual: the Rsq values in the info file should be >
+  1e-16 (and not > 0 as mentioned before) otherwise the output will be set
+  to 'nan'.
+* Minor fix to the man-pages: according to the man-pages palogist,
+  palinear and pacoxph all did regression using a linear model.
 
 
 ***** v.0.4.4 (2014.11.07)