[Genabel-commits] r1730 - in pkg/ProbABEL: checks/inputfiles examples/gtdata

[noreply at r-forge.r-project.org]

Author: lckarssen
Date: 2014-05-19 16:46:52 +0200 (Mon, 19 May 2014)
New Revision: 1730

Modified:
   pkg/ProbABEL/checks/inputfiles/test.map
   pkg/ProbABEL/examples/gtdata/test.map
Log:
Fixed an inconsistency in the naming of the alleles in the test.map file (compared to the test.mlinfo file) in ProbABEL's example and checks directories.


Modified: pkg/ProbABEL/checks/inputfiles/test.map
===================================================================
--- pkg/ProbABEL/checks/inputfiles/test.map	2014-05-19 14:27:43 UTC (rev 1729)
+++ pkg/ProbABEL/checks/inputfiles/test.map	2014-05-19 14:46:52 UTC (rev 1730)
@@ -1,6 +1,6 @@
 rs	position	0	1
-rs7247199	204938	A	G
-rs8102643	207859	C	T
+rs7247199	204938	A	GAC
+rs8102643	207859	C	TGGT
 rs8102615	211970	A	T
 rs8105536	212033	A	G
 rs2312724	217034	C	T

Modified: pkg/ProbABEL/examples/gtdata/test.map
===================================================================
--- pkg/ProbABEL/examples/gtdata/test.map	2014-05-19 14:27:43 UTC (rev 1729)
+++ pkg/ProbABEL/examples/gtdata/test.map	2014-05-19 14:46:52 UTC (rev 1730)
@@ -1,5 +1,5 @@
 rs	position	0	1
-rs7247199	204938	A	G
+rs7247199	204938	A	GAC
 rs8102643	207859	C	T
 rs8102615	211970	A	T
 rs8105536	212033	A	G