[Genabel-commits] r1106 - pkg/GenABEL/R

[noreply at r-forge.r-project.org]

Author: yurii
Date: 2013-02-22 09:53:10 +0100 (Fri, 22 Feb 2013)
New Revision: 1106

Modified:
   pkg/GenABEL/R/polygenic.R
Log:
adding a comment; prepare release of 1.7-4 on CRAN

Modified: pkg/GenABEL/R/polygenic.R
===================================================================
--- pkg/GenABEL/R/polygenic.R	2013-02-14 16:46:21 UTC (rev 1105)
+++ pkg/GenABEL/R/polygenic.R	2013-02-22 08:53:10 UTC (rev 1106)
@@ -571,6 +571,7 @@
 	a <- sum(log(abs(es))) # logarithm of determinant of sigma as sum of logarithm of eigenvalues
 # end new variant
 	b <- (t(resY) %*% InvSigma_x_residualY)
+# this is -2*lnLikelihood
 	loglik <- a+b
 	out$h2an$minimum <- as.vector(loglik)