[Genabel-commits] r1102 - branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results

[noreply at r-forge.r-project.org]

Author: lckarssen
Date: 2013-02-13 10:35:15 +0100 (Wed, 13 Feb 2013)
New Revision: 1102

Modified:
   branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_add.out.txt
   branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_base_add.out.txt
Log:
Merged changes from trunk in the PAcoxfix branch (tests directory)

Modified: branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_add.out.txt
===================================================================
--- branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_add.out.txt	2013-02-12 21:13:42 UTC (rev 1101)
+++ branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_add.out.txt	2013-02-13 09:35:15 UTC (rev 1102)
@@ -1,6 +1,6 @@
 name A1 A2 Freq1 MAF Quality Rsq n Mean_predictor_allele chrom position beta_SNP_add sebeta_SNP_add loglik
-rs7247199 G A 0.5847 0.415 0.9299 0.8666 182 0.56444 1 204938 -0.218693 0.734966 -428.971
-rs8102643 C T 0.5847 0.415 0.9308 0.8685 182 0.564412 1 207859 -0.218352 0.734214 -428.971
-rs8102615 T A 0.5006 0.4702 0.9375 0.8932 181 0.498997 2 211970 0.280289 0.728449 -427.081
-rs8105536 G A 0.5783 0.4213 0.9353 0.8832 182 0.561132 2 212033 -0.216918 0.7259 -428.971
-rs2312724 T C 0.9122 0.0877 0.9841 0.9232 182 0.929684 2 217034 2.23335 1.30142 -427.523
+rs7247199 G A 0.5847 0.415 0.9299 0.8666 182 0.333668 1 204938 20.3845 76.6302 -428.98
+rs8102643 C T 0.5847 0.415 0.9308 0.8685 181 0.808177 1 207859 -25.7623 86.4877 -426.965
+rs8102615 T A 0.5006 0.4702 0.9375 0.8932 182 0.8665 2 211970 -40.7726 102.559 -428.936
+rs8105536 G A 0.5783 0.4213 0.9353 0.8832 182 0.791701 2 212033 35.3607 81.7868 -428.921
+rs2312724 T C 0.9122 0.0877 0.9841 0.9232 182 0.933464 2 217034 -112.236 141.169 -428.694

Modified: branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_base_add.out.txt
===================================================================
--- branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_base_add.out.txt	2013-02-12 21:13:42 UTC (rev 1101)
+++ branches/ProbABEL-pacox/v.0.3.0/ProbABEL/tests/verified_results/height_base_add.out.txt	2013-02-13 09:35:15 UTC (rev 1102)
@@ -1,6 +1,6 @@
 name A1 A2 Freq1 MAF Quality Rsq n Mean_predictor_allele chrom position beta_SNP_add sebeta_SNP_add loglik
-rs7247199 G A 0.5847 0.415 0.9299 0.8666 182 0.56444 19 204938 -0.218693 0.734966 -428.971
-rs8102643 C T 0.5847 0.415 0.9308 0.8685 182 0.564412 19 207859 -0.218352 0.734214 -428.971
-rs8102615 T A 0.5006 0.4702 0.9375 0.8932 181 0.498997 19 211970 0.280289 0.728449 -427.081
-rs8105536 G A 0.5783 0.4213 0.9353 0.8832 182 0.561132 19 212033 -0.216918 0.7259 -428.971
-rs2312724 T C 0.9122 0.0877 0.9841 0.9232 182 0.929684 19 217034 2.23335 1.30142 -427.523
+rs7247199 G A 0.5847 0.415 0.9299 0.8666 182 0.333668 19 204938 20.3845 76.6302 -428.98
+rs8102643 C T 0.5847 0.415 0.9308 0.8685 181 0.808177 19 207859 -25.7623 86.4877 -426.965
+rs8102615 T A 0.5006 0.4702 0.9375 0.8932 182 0.8665 19 211970 -40.7726 102.559 -428.936
+rs8105536 G A 0.5783 0.4213 0.9353 0.8832 182 0.791701 19 212033 35.3607 81.7868 -428.921
+rs2312724 T C 0.9122 0.0877 0.9841 0.9232 182 0.933464 19 217034 -112.236 141.169 -428.694