[Genabel-commits] r953 - in pkg/GenABEL: . R man

[noreply at r-forge.r-project.org]

Author: yurii
Date: 2012-09-14 19:36:56 +0200 (Fri, 14 Sep 2012)
New Revision: 953

Modified:
   pkg/GenABEL/CHANGES.LOG
   pkg/GenABEL/DESCRIPTION
   pkg/GenABEL/R/grammar.R
   pkg/GenABEL/R/zzz.R
   pkg/GenABEL/man/grammar.Rd
Log:
preparing release 1.7-2

Modified: pkg/GenABEL/CHANGES.LOG
===================================================================
--- pkg/GenABEL/CHANGES.LOG	2012-09-03 10:23:07 UTC (rev 952)
+++ pkg/GenABEL/CHANGES.LOG	2012-09-14 17:36:56 UTC (rev 953)
@@ -1,3 +1,9 @@
+***  v. 1.7-2 (2012.10.14)
+
+(2012.09.14, YA)  
+
+Changes in DESCRIPTION and version
+
 (2012.08.29, YA)
 
 Small changes related to CRAN release of 1.7-1; this release is to be 

Modified: pkg/GenABEL/DESCRIPTION
===================================================================
--- pkg/GenABEL/DESCRIPTION	2012-09-03 10:23:07 UTC (rev 952)
+++ pkg/GenABEL/DESCRIPTION	2012-09-14 17:36:56 UTC (rev 953)
@@ -1,11 +1,11 @@
 Package: GenABEL
 Type: Package
 Title: genome-wide SNP association analysis
-Version: 1.7-1
-Date: 2012-08-29
+Version: 1.7-2
+Date: 2012-09-14
 Author: GenABEL project developers
 Contact: GenABEL project developers <genabel.project at gmail.com>
-Maintainer: Yurii Aulchenko <yurii at bionet.nsc.ru>
+Maintainer: Yurii Aulchenko <yurii.aulchenko at gmail.com>
 Depends: R (>= 2.10.0), methods, MASS, utils
 Suggests: qvalue, genetics, haplo.stats, DatABEL (>= 0.9-0), 
 	hglm, MetABEL, PredictABEL, VariABEL 
@@ -13,6 +13,6 @@
              quantitative or binary traits and single-nucleotide
              polymorphisms (SNPs). 
 License: GPL (>= 2)
-URL: http://www.genabel.org, http://forum.genabel.org
+URL: http://www.genabel.org, http://forum.genabel.org, http://genabel.r-forge.r-project.org/
 BugReports: http://r-forge.r-project.org/tracker/?group_id=505
 

Modified: pkg/GenABEL/R/grammar.R
===================================================================
--- pkg/GenABEL/R/grammar.R	2012-09-03 10:23:07 UTC (rev 952)
+++ pkg/GenABEL/R/grammar.R	2012-09-14 17:36:56 UTC (rev 953)
@@ -44,7 +44,7 @@
 #' 
 #' GRAMMAR-Gamma: Svisheva GR, Axenovich TI, Belonogova MN, van Duijn CM, Aulchenko YS. 
 #' Rapid variance componentsÐbased method for whole-genome association analysis. 
-#' (in press)
+#' (http://dx.doi.org/10.1038/ng.2410)
 #' 
 #' @examples 
 #' # Using clean ge03d2 data 

Modified: pkg/GenABEL/R/zzz.R
===================================================================
--- pkg/GenABEL/R/zzz.R	2012-09-03 10:23:07 UTC (rev 952)
+++ pkg/GenABEL/R/zzz.R	2012-09-14 17:36:56 UTC (rev 953)
@@ -4,8 +4,8 @@
 	#pkgDescription <- packageDescription(pkg)
 	#pkgVersion <- pkgDescription$Version
 	#pkgDate <- pkgDescription$Date
-	pkgVersion <- "1.7-1"
-	pkgDate <- "August 29, 2012"
+	pkgVersion <- "1.7-2"
+	pkgDate <- "September 14, 2012"
 	welcomeMessage <- paste(pkg," v. ",pkgVersion," (",pkgDate,") loaded\n",sep="")
 	# check if CRAN version is the same as loaded
 	cranVersion <- checkPackageVersionOnCRAN(pkg)

Modified: pkg/GenABEL/man/grammar.Rd
===================================================================
--- pkg/GenABEL/man/grammar.Rd	2012-09-03 10:23:07 UTC (rev 952)
+++ pkg/GenABEL/man/grammar.Rd	2012-09-14 17:36:56 UTC (rev 953)
@@ -91,7 +91,8 @@
   related individuals. PLoS One. 2007 Dec 5;2(12):e1274.
 
   GRAMMAR-Gamma: Svisheva GR, Axenovich TI, Belonogova MN,
-  van Duijn CM, Aulchenko YS. (in press)
+  van Duijn CM, Aulchenko YS.
+  (http://dx.doi.org/10.1038/ng.2410)
 }
 \seealso{
   \code{\link{polygenic}}, \code{\link{mmscore}},