[Genabel-commits] r901 - branches/ProbABEL-pacox/v.0.1-3/examples

[noreply at r-forge.r-project.org]

Author: lckarssen
Date: 2012-04-29 13:38:41 +0200 (Sun, 29 Apr 2012)
New Revision: 901

Modified:
   branches/ProbABEL-pacox/v.0.1-3/examples/example_cox.sh
Log:
Added prob/dose comparison to the cox example.

Modified: branches/ProbABEL-pacox/v.0.1-3/examples/example_cox.sh
===================================================================
--- branches/ProbABEL-pacox/v.0.1-3/examples/example_cox.sh	2012-04-29 11:29:30 UTC (rev 900)
+++ branches/ProbABEL-pacox/v.0.1-3/examples/example_cox.sh	2012-04-29 11:38:41 UTC (rev 901)
@@ -1,2 +1,8 @@
 echo "analysing Cox model"
-../bin/pacoxph -p coxph_data.txt -d test.mldose -i test.mlinfo -m test.map -c 19 -o coxph.out.txt
+
+../bin/pacoxph -p coxph_data.txt -d test.mldose.2 -i test.mlinfo -m test.map -c 19 -o coxph.out.txt.dose
+
+../bin/pacoxph -p coxph_data.txt -d test.mlprob --ngpreds=2 -i test.mlinfo -m test.map -c 19 -o coxph.out.txt.prob
+
+
+diff coxph.out.txt.dose_add.out.txt coxph.out.txt.prob_add.out.txt