[Genabel-commits] r692 - pkg/webpages www

Tue Mar 8 16:50:01 CET 2011

Author: yurii
Date: 2011-03-08 16:50:01 +0100 (Tue, 08 Mar 2011)
New Revision: 692

Added:
   www/tutHowToInstallDevelVersion.html
Removed:
   pkg/webpages/tutHowToInstallDevelVersion.html
Modified:
   www/index.php
Log:
moving HowToInstallDevelVersion to RForge pages

Deleted: pkg/webpages/tutHowToInstallDevelVersion.html
===================================================================

--- pkg/webpages/tutHowToInstallDevelVersion.html	2011-03-08 11:18:40 UTC (rev 691)
+++ pkg/webpages/tutHowToInstallDevelVersion.html	2011-03-08 15:50:01 UTC (rev 692)
@@ -1,103 +0,0 @@
-<h3>
-How to install devel-version of GenABEL suite
-</h3>
-<p></p>
-<i>
-by Yurii Aulchenko, William Astle and Lennart Karssen for the GenABEL-devel team
-</i>
-<p></p>
-
-Here are instructions on how to get devel-version of GenABEL packages
-working, assuming you use Linux or Mac OS.
-<p></p>
-
-To get GenABEL & Co. running in devel-setting, you need to do a number of
-things. Plan to spend about 30 minutes on that. You will need good
-Inet connection and you also will
-need to have Subversion (svn) installed. 
-<p></p>
-
-1) Check if Subversion is installed. For that, try 'svn help'. If you 
-do get help, everyting must be all right. If Subversion is not there, 
-here is the link, which may help: 
-<a href="http://subversion.apache.org/packages.html">
-http://subversion.apache.org/packages.html
-</a>
-<p></p>
-
-2) In order to be able to compile devel-version, you need to set 
-an environmental variable R_HOME to point the location, where 
-R is installed. We assume that you use Bash (most people do); if not, 
-try to figure out how you can set environmental variables for your particular environment (and let us know so we can add it here :) ). 
-<p></p>
-
-You can check where R is installed by running 'dirname $(which R)' 
-on Bash command prompt. Assuming R is installed at '/usr/bin', add the following lines to your ~/.bashrc file
-<p></p>
-
-<pre>
-R_HOME=/usr/bin
-export R_HOME
-</pre>
-<p></p>
-
-or, you can try
-<p></p>
-
-<pre>
-R_HOME=$(dirname $(which R))
-export R_HOME
-</pre>
-<p></p>
-
-
-log out and log in again, or start a new terminal/console window.
-<p></p>
-
-3) Install _stable_ GenABEL et al., 'roxygen', and 'RUnit' 
-from CRAN; for that on R command line type
-<p></p>
-
-<pre>
-install.packages("GenABEL",dependencies=c("Depends","Suggests"))
-install.packages("roxygen")
-install.packages("RUnit")
-</pre>
-<p></p>
-
-3) Change to a place, where you want the source code 
-to go. Get to the latest code by
-<p></p>
-
-<pre>
-svn export svn://svn.r-forge.r-project.org/svnroot/genabel/pkg
-</pre>
-<p></p>
-
-This should create directory called 'pkg' with all packages 
-in it.
-<p></p>
-
-4) Compile and install latest code by
-<p></p>
-
-<pre>
-cd pkg
-R CMD INSTALL DatABEL
-R CMD INSTALL GenABEL
-... etc.
-</pre>
-<p></p>
-
-Note some packages (e.g. ProbABEL) are not R packages; to 
-compile these use specific Makefile's, e.g.
-<p></p>
-
-<pre>
-cd ProbABEL
-make
-</pre>
-<p></p>
-
-FINITO! Enjoy :)
-<p></p>

Modified: www/index.php
===================================================================
--- www/index.php	2011-03-08 11:18:40 UTC (rev 691)
+++ www/index.php	2011-03-08 15:50:01 UTC (rev 692)
@@ -61,14 +61,27 @@
 <!-- end of project description -->
 
 <p>
-To install GenABEL: start R, type install.packages("GenABEL")  
+<H3>
+These R GenABEL's contributors' pages. The main web-site of GenABEL project is at <a href="http://www.genabel.org">www.GenABEL.org</a>
+</H3> 
 </p>
 
+<p></p>
 <p>
-Tutorial is <a href="http://mga.bionet.nsc.ru/~yurii/ABEL/GenABEL/">HERE</a> ('Documentation' section)
+Tutorials for developers/contributors:
 </p>
+<ul>
+<li>
+<a href="tutHowToInstallDevelVersion.html">
+How to install devel-version of GenABEL suite
+</a>
+</li>
+</ul>
 
-<p> The <strong>project summary page</strong> you can find <a href="http://<?php echo $domain; ?>/projects/<?php echo $group_name; ?>/"><strong>here</strong></a>. </p>
+<p> 
+The <strong>project RForge pages</strong> you can find 
+<a href="http://<?php echo $domain; ?>/projects/<?php echo $group_name; ?>/"><strong>here</strong></a>. 
+</p>
 
 </body>
 </html>

Copied: www/tutHowToInstallDevelVersion.html (from rev 666, pkg/webpages/tutHowToInstallDevelVersion.html)
===================================================================
--- www/tutHowToInstallDevelVersion.html	                        (rev 0)
+++ www/tutHowToInstallDevelVersion.html	2011-03-08 15:50:01 UTC (rev 692)
@@ -0,0 +1,103 @@
+<h3>
+How to install devel-version of GenABEL suite
+</h3>
+<p></p>
+<i>
+by Yurii Aulchenko, William Astle and Lennart Karssen for the GenABEL-devel team
+</i>
+<p></p>
+
+Here are instructions on how to get devel-version of GenABEL packages
+working, assuming you use Linux or Mac OS.
+<p></p>
+
+To get GenABEL & Co. running in devel-setting, you need to do a number of
+things. Plan to spend about 30 minutes on that. You will need good
+Inet connection and you also will
+need to have Subversion (svn) installed. 
+<p></p>
+
+1) Check if Subversion is installed. For that, try 'svn help'. If you 
+do get help, everyting must be all right. If Subversion is not there, 
+here is the link, which may help: 
+<a href="http://subversion.apache.org/packages.html">
+http://subversion.apache.org/packages.html
+</a>
+<p></p>
+
+2) In order to be able to compile devel-version, you need to set 
+an environmental variable R_HOME to point the location, where 
+R is installed. We assume that you use Bash (most people do); if not, 
+try to figure out how you can set environmental variables for your particular environment (and let us know so we can add it here :) ). 
+<p></p>
+
+You can check where R is installed by running 'dirname $(which R)' 
+on Bash command prompt. Assuming R is installed at '/usr/bin', add the following lines to your ~/.bashrc file
+<p></p>
+
+<pre>
+R_HOME=/usr/bin
+export R_HOME
+</pre>
+<p></p>
+
+or, you can try
+<p></p>
+
+<pre>
+R_HOME=$(dirname $(which R))
+export R_HOME
+</pre>
+<p></p>
+
+
+log out and log in again, or start a new terminal/console window.
+<p></p>
+
+3) Install _stable_ GenABEL et al., 'roxygen', and 'RUnit' 
+from CRAN; for that on R command line type
+<p></p>
+
+<pre>
+install.packages("GenABEL",dependencies=c("Depends","Suggests"))
+install.packages("roxygen")
+install.packages("RUnit")
+</pre>
+<p></p>
+
+3) Change to a place, where you want the source code 
+to go. Get to the latest code by
+<p></p>
+
+<pre>
+svn export svn://svn.r-forge.r-project.org/svnroot/genabel/pkg
+</pre>
+<p></p>
+
+This should create directory called 'pkg' with all packages 
+in it.
+<p></p>
+
+4) Compile and install latest code by
+<p></p>
+
+<pre>
+cd pkg
+R CMD INSTALL DatABEL
+R CMD INSTALL GenABEL
+... etc.
+</pre>
+<p></p>
+
+Note some packages (e.g. ProbABEL) are not R packages; to 
+compile these use specific Makefile's, e.g.
+<p></p>
+
+<pre>
+cd ProbABEL
+make
+</pre>
+<p></p>
+
+FINITO! Enjoy :)
+<p></p>

