[Genabel-commits] r673 - pkg/VariABEL

[noreply at r-forge.r-project.org]

Author: maksim
Date: 2011-03-07 11:59:16 +0100 (Mon, 07 Mar 2011)
New Revision: 673

Added:
   pkg/VariABEL/cleanup
   pkg/VariABEL/cleanup.win
   pkg/VariABEL/configure
   pkg/VariABEL/configure.R
   pkg/VariABEL/configure.Rout
   pkg/VariABEL/configure.ac
   pkg/VariABEL/configure.win
Log:


Added: pkg/VariABEL/cleanup
===================================================================
--- pkg/VariABEL/cleanup	                        (rev 0)
+++ pkg/VariABEL/cleanup	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1,3 @@
+rm -f configure.Rout
+rm -f .RData R/.RData
+rm -f src/*.cpp src/*.h src/*.o src/*.uxf src/*.so src/*.dll
\ No newline at end of file


Property changes on: pkg/VariABEL/cleanup
___________________________________________________________________
Added: svn:executable
   + *

Added: pkg/VariABEL/cleanup.win
===================================================================
--- pkg/VariABEL/cleanup.win	                        (rev 0)
+++ pkg/VariABEL/cleanup.win	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1,3 @@
+rm -f configure.Rout
+rm -f .RData R/.RData
+rm -f src/*.cpp src/*.h src/*.o src/*.uxf src/*.so src/*.dll
\ No newline at end of file


Property changes on: pkg/VariABEL/cleanup.win
___________________________________________________________________
Added: svn:executable
   + *

Added: pkg/VariABEL/configure
===================================================================
--- pkg/VariABEL/configure	                        (rev 0)
+++ pkg/VariABEL/configure	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1 @@
+${R_HOME}/bin/R CMD BATCH configure.R


Property changes on: pkg/VariABEL/configure
___________________________________________________________________
Added: svn:executable
   + *

Added: pkg/VariABEL/configure.R
===================================================================
--- pkg/VariABEL/configure.R	                        (rev 0)
+++ pkg/VariABEL/configure.R	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1,18 @@
+#source("generate_documentation.R")
+
+unlink("src/*.cpp")
+unlink("src/*.c")
+unlink("src/*.h")
+unlink("src/*.o")
+unlink("src/*.so")
+unlink("src/*.dll")
+
+flstFV <- list.files("src/fvlib/")
+flstVAR <- list.files("src/VARlib/")
+flstDA <- list.files("src/DAlib/")
+flstITER <- list.files("src/ITERlib/")
+frm <- paste("src/fvlib/",flstFV,sep="")
+frm <- c(frm,paste("src/VARlib/",flstVAR,sep=""))
+frm <- c(frm,paste("src/DAlib/",flstDA,sep=""))
+frm <- c(frm,paste("src/ITERlib/",flstITER,sep=""))
+file.copy(from=frm,to="src", overwrite = TRUE)

Added: pkg/VariABEL/configure.Rout
===================================================================
--- pkg/VariABEL/configure.Rout	                        (rev 0)
+++ pkg/VariABEL/configure.Rout	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1,48 @@
+
+R version 2.12.1 (2010-12-16)
+Copyright (C) 2010 The R Foundation for Statistical Computing
+ISBN 3-900051-07-0
+Platform: x86_64-redhat-linux-gnu (64-bit)
+
+R is free software and comes with ABSOLUTELY NO WARRANTY.
+You are welcome to redistribute it under certain conditions.
+Type 'license()' or 'licence()' for distribution details.
+
+  Natural language support but running in an English locale
+
+R is a collaborative project with many contributors.
+Type 'contributors()' for more information and
+'citation()' on how to cite R or R packages in publications.
+
+Type 'demo()' for some demos, 'help()' for on-line help, or
+'help.start()' for an HTML browser interface to help.
+Type 'q()' to quit R.
+
+[Previously saved workspace restored]
+
+> #source("generate_documentation.R")
+> 
+> unlink("src/*.cpp")
+> unlink("src/*.c")
+> unlink("src/*.h")
+> unlink("src/*.o")
+> unlink("src/*.so")
+> unlink("src/*.dll")
+> 
+> flstFV <- list.files("src/fvlib/")
+> flstVAR <- list.files("src/VARlib/")
+> flstDA <- list.files("src/DAlib/")
+> flstITER <- list.files("src/ITERlib/")
+> frm <- paste("src/fvlib/",flstFV,sep="")
+> frm <- c(frm,paste("src/VARlib/",flstVAR,sep=""))
+> frm <- c(frm,paste("src/DAlib/",flstDA,sep=""))
+> frm <- c(frm,paste("src/ITERlib/",flstITER,sep=""))
+> file.copy(from=frm,to="src", overwrite = TRUE)
+ [1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
+[16] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
+[31] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
+[46] TRUE TRUE
+> 
+> proc.time()
+   user  system elapsed 
+  0.229   0.032   0.301 

Added: pkg/VariABEL/configure.ac
===================================================================
--- pkg/VariABEL/configure.ac	                        (rev 0)
+++ pkg/VariABEL/configure.ac	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1,8 @@
+: ${R_HOME=`R RHOME`}
+if test -z "${R_HOME}"; then
+echo "could not determine R_HOME"
+exit 1
+fi
+CC=`"${R_HOME}/bin/R" CMD config CC`
+CFLAGS="-g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic"
+CPPFLAGS=`${R_HOME}/bin/R" CMD config CPPFLAGS`

Added: pkg/VariABEL/configure.win
===================================================================
--- pkg/VariABEL/configure.win	                        (rev 0)
+++ pkg/VariABEL/configure.win	2011-03-07 10:59:16 UTC (rev 673)
@@ -0,0 +1 @@
+${R_HOME}/bin/R CMD BATCH configure.R


Property changes on: pkg/VariABEL/configure.win
___________________________________________________________________
Added: svn:executable
   + *