[Genabel-commits] r666 - pkg/webpages

[noreply at r-forge.r-project.org]

Author: yurii
Date: 2011-03-04 19:44:15 +0100 (Fri, 04 Mar 2011)
New Revision: 666

Modified:
   pkg/webpages/tutHowToInstallDevelVersion.html
Log:
webpages how to install dev version -- few changes suggested in discussion

Modified: pkg/webpages/tutHowToInstallDevelVersion.html
===================================================================
--- pkg/webpages/tutHowToInstallDevelVersion.html	2011-02-28 17:23:34 UTC (rev 665)
+++ pkg/webpages/tutHowToInstallDevelVersion.html	2011-03-04 18:44:15 UTC (rev 666)
@@ -25,7 +25,7 @@
 </a>
 <p></p>
 
-2) In order to be able to compile devel-dersion, you need to set 
+2) In order to be able to compile devel-version, you need to set 
 an environmental variable R_HOME to point the location, where 
 R is installed. We assume that you use Bash (most people do); if not, 
 try to figure out how you can set environmental variables for your particular environment (and let us know so we can add it here :) ). 
@@ -35,17 +35,19 @@
 on Bash command prompt. Assuming R is installed at '/usr/bin', add the following lines to your ~/.bashrc file
 <p></p>
 
+<pre>
 R_HOME=/usr/bin
-<br>
 export R_HOME
+</pre>
 <p></p>
 
 or, you can try
 <p></p>
 
+<pre>
 R_HOME=$(dirname $(which R))
-<br>
 export R_HOME
+</pre>
 <p></p>
 
 
@@ -56,18 +58,20 @@
 from CRAN; for that on R command line type
 <p></p>
 
+<pre>
 install.packages("GenABEL",dependencies=c("Depends","Suggests"))
-<br>
 install.packages("roxygen")
-<br>
 install.packages("RUnit")
+</pre>
 <p></p>
 
 3) Change to a place, where you want the source code 
 to go. Get to the latest code by
 <p></p>
 
+<pre>
 svn export svn://svn.r-forge.r-project.org/svnroot/genabel/pkg
+</pre>
 <p></p>
 
 This should create directory called 'pkg' with all packages 
@@ -77,21 +81,22 @@
 4) Compile and install latest code by
 <p></p>
 
+<pre>
 cd pkg
-<br>
 R CMD INSTALL DatABEL
-<br>
 R CMD INSTALL GenABEL
-<br>
 ... etc.
+</pre>
 <p></p>
 
 Note some packages (e.g. ProbABEL) are not R packages; to 
 compile these use specific Makefile's, e.g.
 <p></p>
+
+<pre>
 cd ProbABEL
-<br>
 make
+</pre>
 <p></p>
 
 FINITO! Enjoy :)