[Genabel-commits] r738 - branches/ProbABEL/autotools-integration

[noreply at r-forge.r-project.org]

Author: lckarssen
Date: 2011-06-21 22:55:32 +0200 (Tue, 21 Jun 2011)
New Revision: 738

Removed:
   branches/ProbABEL/autotools-integration/Makefile
   branches/ProbABEL/autotools-integration/bin/
   branches/ProbABEL/autotools-integration/doc/
   branches/ProbABEL/autotools-integration/examples/
   branches/ProbABEL/autotools-integration/src/
Log:
Removed everything from the ProbABEL autotools branch. Ready to start from scratch again.

Deleted: branches/ProbABEL/autotools-integration/Makefile
===================================================================
--- branches/ProbABEL/autotools-integration/Makefile	2011-06-20 23:20:11 UTC (rev 737)
+++ branches/ProbABEL/autotools-integration/Makefile	2011-06-21 20:55:32 UTC (rev 738)
@@ -1,51 +0,0 @@
-VERSION = 0.1-9e
-SRCDIR = src
-BINDIR = bin
-DOCDIR = doc
-LINREG = $(BINDIR)/palinear
-LOGREG = $(BINDIR)/palogist
-COXREG = $(BINDIR)/pacoxph
-EXECUTABLES = $(LOGREG) $(LINREG) $(COXREG)
-
-REGFILES =  $(SRCDIR)/data.h $(SRCDIR)/mematrix.h $(SRCDIR)/reg1.h $(SRCDIR)/usage.h $(SRCDIR)/main.cpp
-COXBASE = $(SRCDIR)/chinv2 $(SRCDIR)/cholesky2 $(SRCDIR)/chsolve2 $(SRCDIR)/dmatrix $(SRCDIR)/coxfit2
-COXSRC = $(COXBASE:=.c)
-COXOBJ = $(COXBASE:=.o)
-
-CPP = g++
-CFLAGS = -I $(SRCDIR)/include -O2
-
-all: $(EXECUTABLES) doc
-	cp $(SRCDIR)/extIDS.pl $(BINDIR)/.
-	cp $(SRCDIR)/prepare_data.R $(BINDIR)/.
-	cp $(SRCDIR)/probabel.pl $(BINDIR)/probabel.pl_example
-	cp $(SRCDIR)/probabel_config.cfg $(BINDIR)/probabel_config.cfg_example
-
-$(LINREG): $(REGFILES)
-	$(CPP) $(CFLAGS) -DLINEAR $(SRCDIR)/main.cpp $(SRCDIR)/fvlib/*.cpp -o $(LINREG)
-
-$(LOGREG): $(REGFILES)
-	$(CPP) $(CFLAGS) -DLOGISTIC $(SRCDIR)/main.cpp $(SRCDIR)/fvlib/*.cpp -o $(LOGREG)
-
-$(COXREG): $(COXSRC) $(REGFILES)
-	$(CPP) $(CFLAGS) -DCOXPH $(COXSRC) $(SRCDIR)/main.cpp $(SRCDIR)/fvlib/*.cpp -o $(COXREG)
-
-doc:
-	$(MAKE) -C $(DOCDIR)/
-
-clean: clean_doc
-	rm -f $(BINDIR)/* $(SRCDIR)/*~ $(SRCDIR)/*.o *.zip *.tar.gz examples/*.out.txt examples/*out
-	$(MAKE) clean -C $(DOCDIR)/
-
-clean_doc:
-	$(MAKE) clean_doc -C $(DOCDIR)/
-
-linux_distrib: clean
-	cd .. ; tar -czvf ProbABEL_$(VERSION).tar.gz ProbABEL
-
-win_distrib: all
-	cd .. ; zip -r9 ProbABEL_$(VERSION)_win.zip ProbABEL
-
-distrib: linux_distrib clean win_distrib clean
-
-.PHONY:	distrib linux_distrib win_distrib clean clean_doc doc