[Genabel-commits] r647 - in pkg/MixABEL: . R

[noreply at r-forge.r-project.org]

Author: yurii
Date: 2011-02-10 21:48:05 +0100 (Thu, 10 Feb 2011)
New Revision: 647

Modified:
   pkg/MixABEL/CHANGES.LOG
   pkg/MixABEL/DESCRIPTION
   pkg/MixABEL/R/fastmixmod.R
   pkg/MixABEL/R/zzz.R
Log:
fixed examples, which did not work because of changes in GenABEL

Modified: pkg/MixABEL/CHANGES.LOG
===================================================================
--- pkg/MixABEL/CHANGES.LOG	2011-02-10 19:58:07 UTC (rev 646)
+++ pkg/MixABEL/CHANGES.LOG	2011-02-10 20:48:05 UTC (rev 647)
@@ -1,3 +1,7 @@
+***** v. 0.1-0 (2011.02.10)
+
+fixed examples, which did not work because of changes in GenABEL
+
 ***** v. 0.0-9 (2010.06.17)
 
 messing up with near-singularities & inverses

Modified: pkg/MixABEL/DESCRIPTION
===================================================================
--- pkg/MixABEL/DESCRIPTION	2011-02-10 19:58:07 UTC (rev 646)
+++ pkg/MixABEL/DESCRIPTION	2011-02-10 20:48:05 UTC (rev 647)
@@ -1,8 +1,8 @@
 Package: MixABEL
 Type: Package
 Title: mixed models for genetic association analysis
-Version: 0.0-9
-Date: 2010-06-17
+Version: 0.1-0
+Date: 2011-02-10
 Author: Yurii Aulchenko, William Astle, Erik Roos, Marcel Kempenaar 
 Maintainer: Yurii Aulchenko <i.aoultchenko at erasmusmc.nl>
 Depends: R (>= 2.4.0), MASS, mvtnorm, GenABEL (>= 1.5-8), DatABEL (>= 0.1-5)

Modified: pkg/MixABEL/R/fastmixmod.R
===================================================================
--- pkg/MixABEL/R/fastmixmod.R	2011-02-10 19:58:07 UTC (rev 646)
+++ pkg/MixABEL/R/fastmixmod.R	2011-02-10 20:48:05 UTC (rev 647)
@@ -77,8 +77,8 @@
 #' #mms$chi2.1df
 #' fmm$null.herit
 #' 
-#' cor(mms$chi2.1df,fmm$chi.sq)^2
-#' plot(mms$chi2.1df,fmm$chi.sq)
+#' cor(mms[,"chi2.1df"],fmm$chi.sq)^2
+#' plot(mms[,"chi2.1df"],fmm$chi.sq)
 #' 
 #'
 

Modified: pkg/MixABEL/R/zzz.R
===================================================================
--- pkg/MixABEL/R/zzz.R	2011-02-10 19:58:07 UTC (rev 646)
+++ pkg/MixABEL/R/zzz.R	2011-02-10 20:48:05 UTC (rev 647)
@@ -1,3 +1,3 @@
 .onLoad <- function(lib, pkg) {
-	cat("MixABEL v 0.0-9 (June 17, 2010) loaded\n")
+	cat("MixABEL v 0.1-0 (February 10, 2011) loaded\n")
 }
\ No newline at end of file