[Genabel-commits] r772 - in pkg/GenABEL: . R
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Tue Aug 30 11:18:04 CEST 2011
Author: yurii
Date: 2011-08-30 11:18:04 +0200 (Tue, 30 Aug 2011)
New Revision: 772
Modified:
pkg/GenABEL/CHANGES.LOG
pkg/GenABEL/DESCRIPTION
pkg/GenABEL/R/ss.R
pkg/GenABEL/R/zzz.R
Log:
Change the name of 'maintainer' to genabel at gmail.com to avoid spamming
CRAN people
this version will be submitted to CRAN
Modified: pkg/GenABEL/CHANGES.LOG
===================================================================
--- pkg/GenABEL/CHANGES.LOG 2011-08-29 21:43:30 UTC (rev 771)
+++ pkg/GenABEL/CHANGES.LOG 2011-08-30 09:18:04 UTC (rev 772)
@@ -1,5 +1,8 @@
-*** v. 1.6-8 (2011.08.25)
+*** v. 1.6-8 (2011.08.30)
+Change the name of 'maintainer' to genabel at gmail.com to avoid spamming
+CRAN people
+
added 'strand<-' method for snp.data and gwaa.daat-class
added 'id' argument to 'load.gwaa.daat'. This may be handy when eg
Modified: pkg/GenABEL/DESCRIPTION
===================================================================
--- pkg/GenABEL/DESCRIPTION 2011-08-29 21:43:30 UTC (rev 771)
+++ pkg/GenABEL/DESCRIPTION 2011-08-30 09:18:04 UTC (rev 772)
@@ -2,9 +2,9 @@
Type: Package
Title: genome-wide SNP association analysis
Version: 1.6-8
-Date: 2011-08-25
+Date: 2011-08-30
Author: GenABEL developers
-Maintainer: GenABEL developers <genabel-devel at r-forge.r-project.org>
+Maintainer: GenABEL developers <genabel at gmail.com>
Depends: R (>= 2.10.0), methods, MASS
Suggests: qvalue, genetics, haplo.stats, DatABEL (>= 0.9-0), hglm, MetABEL, PredictABEL
Description: a package for genome-wide association analysis between
Modified: pkg/GenABEL/R/ss.R
===================================================================
--- pkg/GenABEL/R/ss.R 2011-08-29 21:43:30 UTC (rev 771)
+++ pkg/GenABEL/R/ss.R 2011-08-30 09:18:04 UTC (rev 772)
@@ -314,6 +314,7 @@
definition = function(x,i,j,drop)
{
res <- results(x)
+ if (missing(j)) drop=FALSE
return(res[i,j,drop=drop])
}
);
Modified: pkg/GenABEL/R/zzz.R
===================================================================
--- pkg/GenABEL/R/zzz.R 2011-08-29 21:43:30 UTC (rev 771)
+++ pkg/GenABEL/R/zzz.R 2011-08-30 09:18:04 UTC (rev 772)
@@ -1,6 +1,6 @@
.onLoad <- function(lib, pkg) {
GenABEL.version <- "1.6-8"
- cat("GenABEL v.",GenABEL.version,"(August 25, 2011) loaded\n")
+ cat("GenABEL v.",GenABEL.version,"(August 30, 2011) loaded\n")
# check for updates and news
address <- c(
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