[FLR-list] help with bubble plot

[Iago Mosqueira]

Hi,



I can replicate the problem now. The code in the development version of FLCore does not have this problem, although I cannot see why the changes lead to this.



I will update FLCore in the repository tomorrow to version 2.6.6.



Thanks,





Iago





---- On Mon, 19 Feb 2018 10:27:06 +0100 Alessandro Orio <alessandro.orio at slu.se> wrote ----




 

Hi Iago,

 

I’m having the same exact problem and I’m working on the latest version of the package and on R 3.4.

 

This is the plot of the residuals of ple4…

 

Best,

 

Ale

 

 

 

 

 

 



 

 

From: flr-list-bounces at lists.r-forge.r-project.org [mailto:flr-list-bounces at lists.r-forge.r-project.org] On Behalf Of Iago Mosqueira
 Sent: 17 February 2018 16:26
 To: flr-list <flr-list at flr-project.org>
 Subject: Re: [FLR-list] help with bubble plot


 

Hi,


 


I am testing it with the index.res obtained from running FLXSA on ple4 and ple4.indices, which also has some NAs, and I am getting no error


 


library(FLXSA)


data(ple4)


data(ple4.indices)


 


res <- FLXSA(ple4, ple4.indices)


 


bubbles(age ~ year|qname, data = index.res(res))


 


Are you on the latest versions of the package and on R 3.4?


 


Best,


 


 


Iago


 


 


 


---- On Tue, 13 Feb 2018 16:36:43 +0100 Mikaela Bergenius <mikaela.bergenius at slu.se> wrote ----



 


Hi,

Im trying to plot the standardized residuals of my XSA using the function bubbles

bubbles(age ~ year|qname, data = index.res(xsa.results7)).

In an earlier version of R I had no problems with this plot. Now I get this error message in the plot:

 

 

The problem is that in this newest version of FL core if I have NAs in some years of my index I will not get the plot. While before I was getting only an  empty column in the years with NAs. Ca you please advice me on what to do?

Thank you!

 

Mikaela


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