[FLR-list] dim and dimnames in FLQuant

Mon Mar 27 08:55:43 CEST 2017

Hi,

I'm creating some Flquants using some code I have used with earlier R and FLCore versions but now when I specify both the dim and the dimnames, I get the following error

> FLQuant(1, dim=c(1,10,1,1,1,1), dimnames=list(year=2000:2009))
Error in array(as.double(object), dim = dim, dimnames = dimnames) :
  length of 'dimnames' [1] not equal to array extent

Specifying only one of them seems to be fine

> FLQuant(1, dimnames=list(year=2000:2009))

An object of class "FLQuant"

, , unit = unique, season = all, area = unique

     year

quant 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009

  all 1    1    1    1    1    1    1    1    1    1

units:  NA

> flq <- FLQuant(1, dim=c(1,10,1,1,1,1))

> dimnames(flq) <- list(year=2000:2009)

> flq

An object of class "FLQuant"

, , unit = unique, season = all, area = unique

     year

quant 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009

  all 1    1    1    1    1    1    1    1    1    1

units:  NA

Is there a way to specify both within the FLQuant function? Thanks

leire

Below some info on my R session

> sessionInfo()

R version 3.3.3 (2017-03-06)

Platform: x86_64-w64-mingw32/x64 (64-bit)

Running under: Windows 7 x64 (build 7601) Service Pack 1

locale:

[1] LC_COLLATE=Spanish_Spain.1252  LC_CTYPE=Spanish_Spain.1252    LC_MONETARY=Spanish_Spain.1252

[4] LC_NUMERIC=C                   LC_TIME=Spanish_Spain.1252

attached base packages:

[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:

[1] rjags_4-6             coda_0.19-1           FLBEIA_1.15           ggplot2_2.2.1         FLFleet_2.5.20150311

[6] FLCore_2.6.0.20170228 lattice_0.20-34       MASS_7.3-45

loaded via a namespace (and not attached):

 [1] Rcpp_0.12.10     assertthat_0.1   grid_3.3.3       plyr_1.8.4       gtable_0.2.0     stats4_3.3.3

 [7] scales_0.4.1     lazyeval_0.2.0   Matrix_1.2-8     tools_3.3.3      munsell_0.4.3    colorspace_1.3-2

[13] tibble_1.2

Leire Ibaibarriaga
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T. +34 667 174 401 | Mail: libaibarriaga at azti.es<mailto:libaibarriaga at azti.es>

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