[Dplr-commits] r654 - in pkg/dplR: . man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Thu Nov 1 13:54:25 CET 2012
Author: mvkorpel
Date: 2012-11-01 13:54:25 +0100 (Thu, 01 Nov 2012)
New Revision: 654
Modified:
pkg/dplR/ChangeLog
pkg/dplR/DESCRIPTION
pkg/dplR/man/chron.Rd
pkg/dplR/man/detrend.series.Rd
pkg/dplR/man/dplR-package.Rd
pkg/dplR/man/ffcsaps.Rd
pkg/dplR/man/gini.coef.Rd
pkg/dplR/man/hanning.Rd
pkg/dplR/man/rcs.Rd
pkg/dplR/man/rwi.stats.running.Rd
pkg/dplR/man/rwl.stats.Rd
pkg/dplR/man/sens1.Rd
pkg/dplR/man/sens2.Rd
pkg/dplR/man/skel.plot.Rd
pkg/dplR/man/tbrm.Rd
Log:
Changed version to 1.5.7 (1.5.6 has been in CRAN for a long time).
Moved some ChangeLog entries from 1.5.6 to the correct place, 1.5.7.
Added hyphens to ISBN numbers.
Modified: pkg/dplR/ChangeLog
===================================================================
--- pkg/dplR/ChangeLog 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/ChangeLog 2012-11-01 12:54:25 UTC (rev 654)
@@ -1,3 +1,23 @@
+* CHANGES IN dplR VERSION 1.5.7
+
+File: corr.rwl.seg.R
+--------------------
+
+- New feature: allow the master series to be built from a second set of
+ tree ring series by using a data.frame 'master' argument
+- Replaced some for loops with cleaner vectorized operations or apply().
+
+File: sea.R
+-----------
+
+- Extra input checks (e.g. x must have explicit, non-automatic row-names)
+- Some matrices now have the correct type (numeric instead of logical)
+ right from the beginning
+- Small optimization: a temporary matrix is completely overwritten on
+ every round of a loop, so no need to reinitialize
+- Braces always used in if (else) constructs
+
+
* CHANGES IN dplR VERSION 1.5.6
File: write.tucson.R
@@ -22,20 +42,7 @@
- Bug fix: series names were not shown (numbers were shown instead)
- Bug fix: there were off-by-one errors in the length of the bars
-- New feature: allow the master series to be built from a second set of
- tree ring series by using a data.frame 'master' argument
-- Replaced some for loops with cleaner vectorized operations or apply().
-File: sea.R
------------
-
-- Extra input checks (e.g. x must have explicit, non-automatic row-names)
-- Some matrices now have the correct type (numeric instead of logical)
- right from the beginning
-- Small optimization: a temporary matrix is completely overwritten on
- every round of a loop, so no need to reinitialize
-- Braces always used in if (else) constructs
-
File: DESCRIPTION
-----------------
- Changed author and maintainer to Andy Bunn from Andrew G. Bunn to keep parity between
Modified: pkg/dplR/DESCRIPTION
===================================================================
--- pkg/dplR/DESCRIPTION 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/DESCRIPTION 2012-11-01 12:54:25 UTC (rev 654)
@@ -2,8 +2,8 @@
Package: dplR
Type: Package
Title: Dendrochronology Program Library in R
-Version: 1.5.6
-Date: 2012-10-03
+Version: 1.5.7
+Date: 2012-11-01
Authors at R: c(person(c("Andrew", "G."), "Bunn", role = c("aut", "cph",
"cre", "trl"), email = "andrew.bunn at wwu.edu"), person("Mikko",
"Korpela", role = c("aut", "cph")), person("Franco", "Biondi",
Modified: pkg/dplR/man/chron.Rd
===================================================================
--- pkg/dplR/man/chron.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/chron.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -32,11 +32,11 @@
}
\references{
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
- Dendrochronology: Applications in the Environmental Sciences.} Springer.
- \acronym{ISBN-13}: 978-0792305866.
+ Dendrochronology: Applications in the Environmental Sciences.}
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
- Fritts, H. C. (2001) \emph{Tree Rings and Climate.}
- Blackburn. \acronym{ISBN-13}: 978-1930665392.
+ Fritts, H. C. (2001) \emph{Tree Rings and Climate.} Blackburn.
+ \acronym{ISBN-13}: 978-1-930665-39-2.
}
\author{ Andy Bunn. Patched and improved by Mikko Korpela. }
\seealso{ \code{\link{read.rwl}}, \code{\link{detrend}},
Modified: pkg/dplR/man/detrend.series.Rd
===================================================================
--- pkg/dplR/man/detrend.series.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/detrend.series.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -81,10 +81,10 @@
\references{
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate}.
- Blackburn. \acronym{ISBN-13}: 978-1930665392.
+ Blackburn. \acronym{ISBN-13}: 978-1-930665-39-2.
}
\author{ Andy Bunn. Patched and improved by Mikko Korpela. }
\seealso{ \code{\link{detrend}} }
Modified: pkg/dplR/man/dplR-package.Rd
===================================================================
--- pkg/dplR/man/dplR-package.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/dplR-package.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -31,9 +31,9 @@
\references{
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences.}
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate.}
- Blackburn. \acronym{ISBN-13}: 978-1930665392.
+ Blackburn. \acronym{ISBN-13}: 978-1-930665-39-2.
}
\keyword{ package }
Modified: pkg/dplR/man/ffcsaps.Rd
===================================================================
--- pkg/dplR/man/ffcsaps.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/ffcsaps.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -36,7 +36,7 @@
\references{
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
}
\note{ DendroLab website: \url{http://dendrolab.org/} }
\author{
Modified: pkg/dplR/man/gini.coef.Rd
===================================================================
--- pkg/dplR/man/gini.coef.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/gini.coef.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -26,7 +26,7 @@
Handcock. M. S. and Morris, M. (1999) \emph{Relative Distribution
Methods in the Social Sciences}. Springer-Verlag. \acronym{ISBN}:
- 0387987789.
+ 0-387-98778-9.
}
\author{ Mikko Korpela, based on original by Andy Bunn }
\seealso{ \code{\link{rwl.stats}} }
Modified: pkg/dplR/man/hanning.Rd
===================================================================
--- pkg/dplR/man/hanning.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/hanning.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -21,7 +21,7 @@
\references{
Oppenheim, A. V., Schafer, R. W. and Buck, J. R. (1999) \emph{
Discrete-Time Signal Processing (2nd Edition)}. Prentice-Hall.
- \acronym{ISBN-13}: 978-0137549207.
+ \acronym{ISBN-13}: 978-0-13-754920-7.
}
\author{ Andy Bunn. Patched and improved by Mikko Korpela. }
\seealso{ \code{\link[stats]{filter} } }
Modified: pkg/dplR/man/rcs.Rd
===================================================================
--- pkg/dplR/man/rcs.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/rcs.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -76,10 +76,10 @@
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate}.
- Blackburn. \acronym{ISBN-13}: 978-1930665392.
+ Blackburn. \acronym{ISBN-13}: 978-1-930665-39-2.
}
\note{ DendroLab website: \url{http://dendrolab.org/} }
\author{
Modified: pkg/dplR/man/rwi.stats.running.Rd
===================================================================
--- pkg/dplR/man/rwi.stats.running.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/rwi.stats.running.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -179,10 +179,10 @@
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate}. Blackburn.
- \acronym{ISBN-13}: 978-1930665392.
+ \acronym{ISBN-13}: 978-1-930665-39-2.
}
\note{
Modified: pkg/dplR/man/rwl.stats.Rd
===================================================================
--- pkg/dplR/man/rwl.stats.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/rwl.stats.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -34,10 +34,10 @@
Cook, E. R. and Kairiukstis, L.A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate}. Blackburn.
- \acronym{ISBN-13}: 978-1930665392.
+ \acronym{ISBN-13}: 978-1-930665-39-2.
}
\author{ Andy Bunn. Slightly improved by Mikko Korpela. }
Modified: pkg/dplR/man/sens1.Rd
===================================================================
--- pkg/dplR/man/sens1.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/sens1.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -27,10 +27,10 @@
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate}. Blackburn.
- \acronym{ISBN-13}: 978-1930665392.
+ \acronym{ISBN-13}: 978-1-930665-39-2.
}
\author{ Mikko Korpela, based on original by Andy Bunn }
Modified: pkg/dplR/man/sens2.Rd
===================================================================
--- pkg/dplR/man/sens2.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/sens2.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -27,10 +27,10 @@
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Fritts, H. C. (2001) \emph{Tree Rings and Climate}. Blackburn.
- \acronym{ISBN-13}: 978-1930665392.
+ \acronym{ISBN-13}: 978-1-930665-39-2.
}
\author{ Mikko Korpela, based on original by Andy Bunn }
Modified: pkg/dplR/man/skel.plot.Rd
===================================================================
--- pkg/dplR/man/skel.plot.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/skel.plot.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -62,7 +62,7 @@
Stokes, M. A. and Smiley, T. L. (1968) \emph{An Introduction to
Tree-Ring Dating}. The University of Arizona Press.
- \acronym{ISBN-13}: 978-0816516803.
+ \acronym{ISBN-13}: 978-0-8165-1680-3.
Sheppard, P. R. (2002) Crossdating Tree Rings Using Skeleton Plotting.
\url{http://www.ltrr.arizona.edu/skeletonplot/introcrossdate.htm}
Modified: pkg/dplR/man/tbrm.Rd
===================================================================
--- pkg/dplR/man/tbrm.Rd 2012-10-03 12:15:09 UTC (rev 653)
+++ pkg/dplR/man/tbrm.Rd 2012-11-01 12:54:25 UTC (rev 654)
@@ -38,11 +38,11 @@
Cook, E. R. and Kairiukstis, L. A. (1990) \emph{Methods of
Dendrochronology: Applications in the Environmental Sciences}.
- Springer. \acronym{ISBN-13}: 978-0792305866.
+ Springer. \acronym{ISBN-13}: 978-0-7923-0586-6.
Mosteller, F. and Tukey, J. W. (1977) \emph{Data Analysis and
Regression: a second course in statistics}. Addison-Wesley.
- \acronym{ISBN-13}: 978-0201048544.
+ \acronym{ISBN-13}: 978-0-201-04854-4.
Shewchuk, J. R. (1997) Adaptive Precision Floating-Point Arithmetic
and Fast Robust Geometric Predicates. \emph{Discrete and
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