[Distr-commits] r575 - in branches/distr-2.2/pkg: SweaveListingUtils/chm SweaveListingUtils/inst distr/chm distr/inst distr/inst/doc distr/man distrDoc/chm distrDoc/inst distrDoc/man distrEllipse distrEllipse/chm distrEllipse/inst distrEllipse/man distrEx/chm distrEx/inst distrEx/man distrEx/src distrMod/chm distrMod/inst distrMod/man distrSim/chm distrSim/inst distrSim/man distrTEst/chm distrTEst/inst distrTEst/man distrTeach/chm distrTeach/inst distrTeach/man startupmsg/chm startupmsg/inst utils
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Sep 4 17:07:54 CEST 2009
Author: ruckdeschel
Date: 2009-09-04 17:07:53 +0200 (Fri, 04 Sep 2009)
New Revision: 575
Added:
branches/distr-2.2/pkg/distrEllipse/man/MvnormDistribution-class.Rd
branches/distr-2.2/pkg/distrEllipse/man/MvnormDistribution.Rd
branches/distr-2.2/pkg/distrEllipse/man/MvnormParameter-class.Rd
branches/distr-2.2/pkg/distrEllipse/man/MvtDistribution-class.Rd
branches/distr-2.2/pkg/distrEllipse/man/MvtDistribution.Rd
branches/distr-2.2/pkg/distrEllipse/man/MvtParameter-class.Rd
branches/distr-2.2/pkg/utils/NEWS
branches/distr-2.2/pkg/utils/TOBEDONE
branches/distr-2.2/pkg/utils/showAllFiles.R
branches/distr-2.2/pkg/utils/showsvnlog.R
Removed:
branches/distr-2.2/pkg/utils/tobedonePaste.R
Modified:
branches/distr-2.2/pkg/SweaveListingUtils/chm/0SweaveListingUtils-package.html
branches/distr-2.2/pkg/SweaveListingUtils/chm/SweaveListingUtils.chm
branches/distr-2.2/pkg/SweaveListingUtils/inst/NEWS
branches/distr-2.2/pkg/distr/chm/0distr-package.html
branches/distr-2.2/pkg/distr/chm/Distr.chm
branches/distr-2.2/pkg/distr/inst/NEWS
branches/distr-2.2/pkg/distr/inst/doc/Rplots.pdf
branches/distr-2.2/pkg/distr/man/0distr-package.Rd
branches/distr-2.2/pkg/distrDoc/chm/0distrDoc-package.html
branches/distr-2.2/pkg/distrDoc/chm/distrDoc.chm
branches/distr-2.2/pkg/distrDoc/inst/NEWS
branches/distr-2.2/pkg/distrDoc/man/0distrDoc-package.Rd
branches/distr-2.2/pkg/distrEllipse/DESCRIPTION
branches/distr-2.2/pkg/distrEllipse/chm/00Index.html
branches/distr-2.2/pkg/distrEllipse/chm/0distrEllipse-package.html
branches/distr-2.2/pkg/distrEllipse/chm/MvnormParameter-class.html
branches/distr-2.2/pkg/distrEllipse/chm/MvtParameter-class.html
branches/distr-2.2/pkg/distrEllipse/chm/distrEllipse.chm
branches/distr-2.2/pkg/distrEllipse/chm/distrEllipse.toc
branches/distr-2.2/pkg/distrEllipse/inst/NEWS
branches/distr-2.2/pkg/distrEllipse/man/0distrEllipse-package.Rd
branches/distr-2.2/pkg/distrEx/chm/0distrEx-package.html
branches/distr-2.2/pkg/distrEx/chm/distrEx.chm
branches/distr-2.2/pkg/distrEx/inst/NEWS
branches/distr-2.2/pkg/distrEx/man/0distrEx-package.Rd
branches/distr-2.2/pkg/distrEx/src/distrEx.dll
branches/distr-2.2/pkg/distrMod/chm/0distrMod-package.html
branches/distr-2.2/pkg/distrMod/chm/distrMod.chm
branches/distr-2.2/pkg/distrMod/inst/NEWS
branches/distr-2.2/pkg/distrMod/man/0distrMod-package.Rd
branches/distr-2.2/pkg/distrSim/chm/0distrSim-package.html
branches/distr-2.2/pkg/distrSim/chm/distrSim.chm
branches/distr-2.2/pkg/distrSim/inst/NEWS
branches/distr-2.2/pkg/distrSim/man/0distrSim-package.Rd
branches/distr-2.2/pkg/distrTEst/chm/0distrTEst-package.html
branches/distr-2.2/pkg/distrTEst/chm/distrTEst.chm
branches/distr-2.2/pkg/distrTEst/inst/NEWS
branches/distr-2.2/pkg/distrTEst/man/0distrTEst-package.Rd
branches/distr-2.2/pkg/distrTeach/chm/0distrTeach-package.html
branches/distr-2.2/pkg/distrTeach/chm/distrTeach.chm
branches/distr-2.2/pkg/distrTeach/inst/NEWS
branches/distr-2.2/pkg/distrTeach/man/0distrTeach-package.Rd
branches/distr-2.2/pkg/startupmsg/chm/startupmsg.chm
branches/distr-2.2/pkg/startupmsg/inst/NEWS
branches/distr-2.2/pkg/utils/README-R-utils
Log:
all packages:
updated NEWS files
inserted remark section on package versions into each <pkg>-package.Rd file
distrEllipse: had forgotten some .Rd files
utils: has a NEWS and a TOBEDONE file now; reorganized some files
Modified: branches/distr-2.2/pkg/SweaveListingUtils/chm/0SweaveListingUtils-package.html
===================================================================
--- branches/distr-2.2/pkg/SweaveListingUtils/chm/0SweaveListingUtils-package.html 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/SweaveListingUtils/chm/0SweaveListingUtils-package.html 2009-09-04 15:07:53 UTC (rev 575)
@@ -33,27 +33,27 @@
<table summary="Rd table">
<tr>
<td align="left">
-Package: </td><td align="left"> SweaveListingUtils</td>
+Package: </td><td align="left"> SweaveListingUtils </td>
</tr>
<tr>
<td align="left">
-Version: </td><td align="left"> 0.4</td>
+Version: </td><td align="left"> 0.4 </td>
</tr>
<tr>
<td align="left">
-Date: </td><td align="left"> 2009-08-10</td>
+Date: </td><td align="left"> 2009-09-04 </td>
</tr>
<tr>
<td align="left">
-Depends: </td><td align="left"> R(>= 2.0.0), startupmsg</td>
+Depends: </td><td align="left"> R(>= 2.10.0), startupmsg </td>
</tr>
<tr>
<td align="left">
-LazyLoad: </td><td align="left"> yes</td>
+LazyLoad: </td><td align="left"> yes </td>
</tr>
<tr>
<td align="left">
-License: </td><td align="left"> LGPL-3</td>
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
<td align="left">
Modified: branches/distr-2.2/pkg/SweaveListingUtils/chm/SweaveListingUtils.chm
===================================================================
(Binary files differ)
Modified: branches/distr-2.2/pkg/SweaveListingUtils/inst/NEWS
===================================================================
--- branches/distr-2.2/pkg/SweaveListingUtils/inst/NEWS 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/SweaveListingUtils/inst/NEWS 2009-09-04 15:07:53 UTC (rev 575)
@@ -3,6 +3,80 @@
######################################################################
##############
+v 0.4
+##############
+
+user-visible CHANGES:
+
++ commands:
+ * SweaveListingPreparations() gains arguments fileCommand and pkgCommand to define TeX macros \file \pkg;
+ correspondingly, there are new SweaveListingOptions...
+ * integrated Andrew Ellis's nice ideas into SweaveListingUtils to use \lstenvironment
+ * individual markup style for base or recommended packages (checked for with new function
+ isBaseOrRecommended()) is distinct now by default (extra color RRecomdcolor)
+ * new arg withSchunkDef in SweaveListingPreparations
+ * when SweaveListingPreparations is used with argument 'withOwnFileSection'=TRUE
+ lstsetR and lstsetRd use argument 'add' = FALSE by default
+ * temporarily changes (like background color) made easier:
+ - new functions
+ # lstdefRstyle to change Rstyle
+ # lstsetRall to change all R-like styles (i.e. Rstyle, Rinstyle, Routstyle, Rcodestyle)
+ * now can specify styles for Sinput, Soutput, Scode, separately as Rin, Rout, Rcode
+ * colors now have suffix "color", i.e. Rcomment -> Rcommentcolor, Rout -> Routcolor
++ vignette:
+ * included an example with escape sequences in vignette
+ * included an example with framed code in vignette
+
+GENERAL ENHANCEMENTS:
+
++ added field "Encoding: latin1" to all DESCRIPTION files in order to avoid problems
+ with e.g. Windows locale when svn replaces $LastChangedDate
++ added TOBEDONE (sic!) files for each package (by accident also in trunc; these are empty so far)
++ vignette:
+ * included svn-multi style files to /inst/doc folders for upload on CRAN
+
+INTERNALLY:
+
++ added a suggestion by Frank Harrell to the vignette of SweaveListingUtils
++ yet another literate programming with listings -- ~,^,<=, >= as suggested by Frank Harrell
++ Rdlisting.sty updated according to updated version of Murdoch paper
++ keywords are drawn from ls(search(...))-results in decreasing alphabetical order now
++ linewidth by default is now read from getOption("width")
++ now have a unique counter for incremental definitions of Rstyle(s):
+ % note: we define styles RstyleO<num> incrementally, i.e.
+ % \lstdefinestyle{RstyleO<num>}{style = RstyleO<num-1>,
+ % <further definitions for RstyleO<num> > }
+ % and then overwrite each time style Rstyle by
+ % \lstdefinestyle{Rstyle}{style=RstyleO<num>}
+ * with lstdefRstyle Rstyle is no longer only changed after require(), library()
+ -> renamed counter from .numberofRequires to .numberofRstyleDefs
++ the same is now used with
++ Small changes in SweaveListingPreparations.R, <..>.Rd and SweaveListingUtils.R
+ in order to work well with our distrMod article.
++ in lstset.R: new internal functions to standardize behavior and make maintenance easier (start with ".")
++ moved parts of former SweaveListingUtils.R to taglist.R and lstset.R
++ new option extendedchars = false as default according to Mail by Rasmus Pank Roulund
+
+
+BUGFIXES:
+
++ fixed some issues in SweaveListingUtils --- Rdlisting.sty
+ somehow had not respected capitalization ...
++ updated MASKING and NEWS entries in SweaveListingUtils
++ distr in Suggests for SweaveListingUtils
++ fixed mis-spelled Frank Harre_ll_
++ fixed issues with multiple definitions of morekeywords for listings style Rstyle
++ fixed buglets in keywordstyles (caused error in vignette to distr)
++ fixed some buglet in SweaveListingUtils.R (only appeared when vignette building was skipped)
++ the five-fold backslashes issue
+ * require R-2.10.0 for version (0.4) [using new Rd-parser]/ versions (< 0.4) use old Rd-parser
+ * corresponding note in 0SweaveListingUtils-package.Rd
+ * replaced \verb with \code in .Rd-files to version 0.3.5
+ (so it works with .Rd version 1.0 resp. 2.9.x)
++ \href inserted for PR's mail address (otherwise some wrong link was produced; remarked by A. Hausmann)
+
+
+##############
v 0.3.1
##############
* when SweaveListingPreparations is used with argument 'withOwnFileSection'=TRUE
Modified: branches/distr-2.2/pkg/distr/chm/0distr-package.html
===================================================================
--- branches/distr-2.2/pkg/distr/chm/0distr-package.html 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distr/chm/0distr-package.html 2009-09-04 15:07:53 UTC (rev 575)
@@ -71,15 +71,15 @@
<table summary="Rd table">
<tr>
<td align="left">
-Package: </td><td align="left"> distr</td>
+Package: </td><td align="left"> distr </td>
</tr>
<tr>
<td align="left">
-Version: </td><td align="left"> 2.2</td>
+Version: </td><td align="left"> 2.2 </td>
</tr>
<tr>
<td align="left">
-Date: </td><td align="left"> 2009-03-19</td>
+Date: </td><td align="left"> 2009-09-04 </td>
</tr>
<tr>
<td align="left">
@@ -88,19 +88,19 @@
</tr>
<tr>
<td align="left">
-LazyLoad: </td><td align="left"> yes</td>
+LazyLoad: </td><td align="left"> yes </td>
</tr>
<tr>
<td align="left">
-License: </td><td align="left"> LGPL-3</td>
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
<td align="left">
-License: </td><td align="left"> LGPL-3</td>
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
<td align="left">
-License: </td><td align="left"> GPL (version 2 or later)</td>
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
<td align="left">
@@ -371,11 +371,23 @@
our distribution classes.</dd>
<dt><span class="pkg">distrMod</span></dt><dd>provides classes for parametric models and hence covers,
in an object orientated way, estimation in statistical models.</dd>
+<dt><span class="pkg">distrEllipse</span></dt><dd>provides classes for elliptically symmetric
+distributions.</dd>
</dl>
</p>
+<h3>Package versions</h3>
+
+<p>
+Note: The first two numbers of package versions do not necessarily reflect
+package-individual development, but rather are chosen for the
+distrXXX family as a whole in order to ease updating "depends"
+information.
+</p>
+
+
<h3>Acknowledgement</h3>
<p>
Modified: branches/distr-2.2/pkg/distr/chm/Distr.chm
===================================================================
(Binary files differ)
Modified: branches/distr-2.2/pkg/distr/inst/NEWS
===================================================================
--- branches/distr-2.2/pkg/distr/inst/NEWS 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distr/inst/NEWS 2009-09-04 15:07:53 UTC (rev 575)
@@ -1,8 +1,61 @@
######################################################################
# News: to package distr
######################################################################
+
+(first two numbers of package versions do not necessarily reflect
+ package-individual development, but rather are chosen for the
+ distrXXX family as a whole in order to ease updating "depends"
+ information)
##############
+v 2.2
+##############
+
+user-visible CHANGES:
+
++ moved Distribution symmetry classes and corresponding methods/functions from distrMod to distr
+ * introduced new slot "Symmetry" (of Class "DistributionSymmetry") in class Distribution
+ * adapted all algorithms in distr (arithmetics; generators) to take care about this new slot
+
+
++ (sort of) version management
+ * enhanced conv2NewVersion --- did not work before as intended in cases where
+ there is a particular initialized method with less arguments...
+ * correspondingly .lowerExact, .logExact Symmetry methods now are exported
+ * .lowerExact, .logExact methods now issue a warning before coercing to new version and
+ return corresponding slot of converted object
+ * corrected some small bug in demo ConvolutionNormalDistr.R
+ * method for UnivarMixingDistribution
+
++ enhanced abs()
+ * for ContDistribution / DiscreteDistribution
+ * for ContDistribution now forces argument x --- caused errors in mad() for instance
+
++ in distr generating functions [Univar]DistrList() gain Dlist argument
+
+
+GENERAL ENHANCEMENTS:
+
++ added field "Encoding: latin1" to all DESCRIPTION files in order to avoid problems
+ with e.g. Windows locale when svn replaces $LastChangedDate
++ added TOBEDONE (sic!) files for each package (by accident also in trunc; these are empty so far)
++ vignette:
+ * included svn-multi style files to /inst/doc folders for upload on CRAN
+
+BUGFIXES:
+
++ fixed an inconsistency of Truncate for DiscreteDistributions; to better match Huberize and Min/Max
+ Truncation should be done for m<=object<=M instead of m<object<=M --- also the reason why
+ demo censoredPois of distrMod threw errors.
++ changed initialize methods for AbscontDistribution and DiscreteDistribution in distr;
++ RtoDPQ.LC now correctly sets .withArith, .withSim slots in discretePart and .logExact,
+ .lowerExact in both discretePart and acPart
++ fixed a minor error in manual to plot-methods
++ fixed issue in .presubs after change of for() etc semantics
++ fixed buglet in .qmixfun
++ internal helper function .trunc.low wrongly used p.l and q.r ...
+
+##############
v 2.1
##############
Modified: branches/distr-2.2/pkg/distr/inst/doc/Rplots.pdf
===================================================================
--- branches/distr-2.2/pkg/distr/inst/doc/Rplots.pdf 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distr/inst/doc/Rplots.pdf 2009-09-04 15:07:53 UTC (rev 575)
@@ -2,8 +2,8 @@
%âãÏÓ\r
1 0 obj
<<
-/CreationDate (D:20090904015406)
-/ModDate (D:20090904015406)
+/CreationDate (D:20090904141215)
+/ModDate (D:20090904141215)
/Title (R Graphics Output)
/Producer (R 2.10.0)
/Creator (R)
@@ -275,7 +275,7 @@
65.15 74.45 l
65.25 74.75 l
65.35 75.05 l
-65.45 75.37 l
+65.45 75.36 l
65.55 75.68 l
65.65 76.01 l
65.75 76.34 l
@@ -367,7 +367,7 @@
74.45 149.49 l
74.55 151.02 l
74.65 152.57 l
-74.75 154.13 l
+74.75 154.14 l
74.85 155.72 l
74.95 157.32 l
75.05 158.94 l
@@ -375,12 +375,12 @@
75.26 162.23 l
75.36 163.91 l
75.46 165.60 l
-75.56 167.30 l
+75.56 167.31 l
75.66 169.03 l
75.76 170.77 l
75.86 172.53 l
75.96 174.31 l
-76.06 176.10 l
+76.06 176.11 l
76.17 177.92 l
76.27 179.75 l
76.37 181.59 l
@@ -400,8 +400,8 @@
77.78 209.10 l
77.88 211.18 l
77.99 213.27 l
-78.09 215.38 l
-78.19 217.50 l
+78.09 215.37 l
+78.19 217.49 l
78.29 219.63 l
78.39 221.77 l
78.49 223.93 l
@@ -452,14 +452,14 @@
83.04 328.28 l
83.14 330.60 l
83.24 332.92 l
-83.34 335.23 l
+83.34 335.22 l
83.44 337.53 l
83.55 339.82 l
83.65 342.10 l
83.75 344.37 l
83.85 346.63 l
83.95 348.88 l
-84.05 351.12 l
+84.05 351.11 l
84.15 353.34 l
84.25 355.55 l
84.35 357.75 l
@@ -468,12 +468,12 @@
84.66 364.26 l
84.76 366.40 l
84.86 368.52 l
-84.96 370.63 l
+84.96 370.62 l
85.06 372.71 l
-85.16 374.78 l
+85.16 374.79 l
85.26 376.84 l
85.37 378.87 l
-85.47 380.89 l
+85.47 380.88 l
85.57 382.88 l
85.67 384.85 l
85.77 386.81 l
@@ -493,7 +493,7 @@
87.19 411.66 l
87.29 413.24 l
87.39 414.79 l
-87.49 416.32 l
+87.49 416.31 l
87.59 417.81 l
87.69 419.27 l
87.79 420.70 l
@@ -579,7 +579,7 @@
95.88 419.32 l
95.98 417.88 l
96.08 416.41 l
-96.18 414.92 l
+96.18 414.91 l
96.28 413.39 l
96.39 411.84 l
96.49 410.26 l
@@ -608,7 +608,7 @@
98.81 367.63 l
98.91 365.56 l
99.01 363.46 l
-99.11 361.35 l
+99.11 361.36 l
99.22 359.24 l
99.32 357.10 l
99.42 354.96 l
@@ -623,7 +623,7 @@
100.33 335.17 l
100.43 332.93 l
100.53 330.68 l
-100.63 328.42 l
+100.63 328.43 l
100.73 326.16 l
100.83 323.90 l
100.93 321.63 l
@@ -631,26 +631,26 @@
101.14 317.07 l
101.24 314.79 l
101.34 312.50 l
-101.44 310.22 l
+101.44 310.21 l
101.54 307.93 l
-101.64 305.64 l
+101.64 305.63 l
101.74 303.34 l
101.84 301.05 l
-101.95 298.75 l
+101.95 298.76 l
102.05 296.46 l
102.15 294.17 l
102.25 291.88 l
102.35 289.59 l
102.45 287.30 l
102.55 285.02 l
-102.65 282.73 l
+102.65 282.74 l
102.75 280.46 l
102.86 278.18 l
102.96 275.91 l
103.06 273.64 l
103.16 271.38 l
103.26 269.12 l
-103.36 266.87 l
+103.36 266.88 l
103.46 264.63 l
103.56 262.39 l
103.66 260.16 l
@@ -664,13 +664,13 @@
104.47 242.59 l
104.57 240.43 l
104.68 238.28 l
-104.78 236.15 l
+104.78 236.14 l
104.88 234.02 l
104.98 231.90 l
105.08 229.80 l
105.18 227.71 l
-105.28 225.62 l
-105.38 223.56 l
+105.28 225.63 l
+105.38 223.55 l
105.48 221.50 l
105.59 219.45 l
105.69 217.42 l
@@ -682,9 +682,9 @@
106.29 205.49 l
106.39 203.55 l
106.49 201.63 l
-106.60 199.71 l
+106.60 199.72 l
106.70 197.82 l
-106.80 195.94 l
+106.80 195.93 l
106.90 194.07 l
107.00 192.21 l
107.10 190.37 l
@@ -716,7 +716,7 @@
109.73 148.09 l
109.83 146.68 l
109.93 145.29 l
-110.03 143.91 l
+110.03 143.92 l
110.13 142.56 l
110.24 141.21 l
110.34 139.89 l
@@ -724,7 +724,7 @@
110.54 137.28 l
110.64 136.00 l
110.74 134.74 l
-110.84 133.50 l
+110.84 133.49 l
110.94 132.26 l
111.04 131.05 l
111.15 129.85 l
@@ -733,7 +733,7 @@
111.45 126.35 l
111.55 125.21 l
111.65 124.09 l
-111.75 122.98 l
+111.75 122.99 l
111.85 121.89 l
111.95 120.82 l
112.06 119.76 l
@@ -798,7 +798,7 @@
118.02 79.71 l
118.12 79.34 l
118.22 78.97 l
-118.32 78.61 l
+118.32 78.62 l
118.42 78.26 l
118.53 77.92 l
118.63 77.58 l
@@ -861,7 +861,7 @@
124.39 66.88 l
124.49 66.80 l
124.59 66.72 l
-124.69 66.63 l
+124.69 66.64 l
124.79 66.56 l
124.89 66.48 l
125.00 66.40 l
Modified: branches/distr-2.2/pkg/distr/man/0distr-package.Rd
===================================================================
--- branches/distr-2.2/pkg/distr/man/0distr-package.Rd 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distr/man/0distr-package.Rd 2009-09-04 15:07:53 UTC (rev 575)
@@ -303,9 +303,18 @@
our distribution classes.}
\item{\pkg{distrMod}}{provides classes for parametric models and hence covers,
in an object orientated way, estimation in statistical models.}
+\item{\pkg{distrEllipse}}{provides classes for elliptically symmetric
+distributions.}
}
}
+\section{Package versions}{
+Note: The first two numbers of package versions do not necessarily reflect
+ package-individual development, but rather are chosen for the
+ distrXXX family as a whole in order to ease updating "depends"
+ information.
+}
+
\section{Acknowledgement}{
We thank Martin Maechler, Josef Leydold, John Chambers,
Duncan Murdoch, Gregory Warnes, Paul Gilbert, Kurt Hornik,
Modified: branches/distr-2.2/pkg/distrDoc/chm/0distrDoc-package.html
===================================================================
--- branches/distr-2.2/pkg/distrDoc/chm/0distrDoc-package.html 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distrDoc/chm/0distrDoc-package.html 2009-09-04 15:07:53 UTC (rev 575)
@@ -1,20 +1,17 @@
-<html><head><title>distrDoc – documentation for packages distr, distrEx, distrMod,
-distrTeach, distrSim, distrTEst</title>
-<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
+<html><head><title>distrDoc – documentation for packages distr, distrEx, distrMod, distrTeach, distrSim, distrTEst</title>
+<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<link rel="stylesheet" type="text/css" href="Rchm.css">
-</head>
-<body>
+</head><body>
-<table width="100%"><tr><td>distrDoc-package(distrDoc)</td><td align="right">R Documentation</td></tr></table><object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
+<table width="100%"><tr><td>distrDoc-package(distrDoc)</td><td align="right">R Documentation</td></tr></table>
+<object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
<param name="keyword" value="R: distrDoc-package">
<param name="keyword" value="R: distrDoc">
-<param name="keyword" value=" distrDoc – documentation for packages distr distrEx distrMod
-distrTeach distrSim distrTEst">
+<param name="keyword" value=" distrDoc – documentation for packages distr, distrEx, distrMod, distrTeach, distrSim, distrTEst">
</object>
-<h2>distrDoc – documentation for packages distr distrEx distrMod
-distrTeach distrSim distrTEst</h2>
+<h2>distrDoc – documentation for packages distr, distrEx, distrMod, distrTeach, distrSim, distrTEst</h2>
<h3>Description</h3>
@@ -29,37 +26,52 @@
<h3>Details</h3>
<p>
+
+</p>
<table summary="Rd table">
<tr>
- <td align="left">Package: </td> <td align="left"> distrDoc</td>
+ <td align="left">
+Package: </td><td align="left"> distrDoc </td>
</tr>
<tr>
- <td align="left"> Version: </td> <td align="left"> 2.2</td>
+ <td align="left">
+Version: </td><td align="left"> 2.2 </td>
</tr>
<tr>
- <td align="left"> Date: </td> <td align="left"> 2009-03-19</td>
+ <td align="left">
+Date: </td><td align="left"> 2009-09-04 </td>
</tr>
<tr>
- <td align="left"> Depends: </td> <td align="left"> R(>= 2.6.0), tools, distr(>= 2.0.0), startupmsg</td>
+ <td align="left">
+Depends: </td><td align="left"> R(>= 2.6.0), tools, distr(>= 2.2.0), startupmsg, distrEx(>= 2.2.0), distrSim(>= 2.2.0), distrTEst(>= 2.2.0), distrTeach(>=
+2.2.0), RandVar(>= 0.7), distrMod(>= 2.2.0), MASS, methods </td>
</tr>
<tr>
- <td align="left"> LazyLoad: </td> <td align="left"> yes</td>
+ <td align="left">
+LazyLoad: </td><td align="left"> yes </td>
</tr>
<tr>
- <td align="left"> License: </td> <td align="left"> LGPL-3</td>
+ <td align="left">
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
- <td align="left"> URL: </td> <td align="left"> http://distr.r-forge.r-project.org/</td>
+ <td align="left">
+URL: </td><td align="left"> http://distr.r-forge.r-project.org/</td>
</tr>
-</table>
+<tr>
+ <td align="left">
+</td>
+</tr>
+</table><p>
+</p>
+
<h3>Acknowledgement</h3>
<p>
The idea to split off a common vignette for a set of packages
-in a particular documentation package is due to Seth Falcon.
-</p>
+in a particular documentation package is due to Seth Falcon.</p>
<h3>Start-up-Banner</h3>
@@ -89,6 +101,16 @@
</p>
+<h3>Package versions</h3>
+
+<p>
+Note: The first two numbers of package versions do not necessarily reflect
+package-individual development, but rather are chosen for the
+distrXXX family as a whole in order to ease updating "depends"
+information.
+</p>
+
+
<h3>Author(s)</h3>
<p>
@@ -104,8 +126,7 @@
<h3>See Also</h3>
-<p>
-see mails "[Rd] package vignettes, suggests and R CMD check"
+<p>see mails "[Rd] package vignettes, suggests and R CMD check"
on r-devel by Seth Falcon,<br>
<a href="https://stat.ethz.ch/pipermail/r-devel/2006-November/043702.html">https://stat.ethz.ch/pipermail/r-devel/2006-November/043702.html</a>,<br>
<a href="https://stat.ethz.ch/pipermail/r-devel/2006-November/043705.html">https://stat.ethz.ch/pipermail/r-devel/2006-November/043705.html</a>,<br>
@@ -121,11 +142,9 @@
## Not run:
## Open the distr vignette
vignette("distr")
+
## End(Not run)
</pre>
-
-
<hr><div align="center">[Package <em>distrDoc</em> version 2.2 <a href="00Index.html">Index</a>]</div>
-
</body></html>
Modified: branches/distr-2.2/pkg/distrDoc/chm/distrDoc.chm
===================================================================
(Binary files differ)
Modified: branches/distr-2.2/pkg/distrDoc/inst/NEWS
===================================================================
--- branches/distr-2.2/pkg/distrDoc/inst/NEWS 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distrDoc/inst/NEWS 2009-09-04 15:07:53 UTC (rev 575)
@@ -2,7 +2,24 @@
# News: to package distrDoc
######################################################################
+(first two numbers of package versions do not necessarily reflect
+ package-individual development, but rather are chosen for the
+ distrXXX family as a whole in order to ease updating "depends"
+ information)
+
##############
+v 2.2
+##############
+
+GENERAL ENHANCEMENTS:
+
++ added field "Encoding: latin1" to all DESCRIPTION files in order to avoid problems
+ with e.g. Windows locale when svn replaces $LastChangedDate
++ added TOBEDONE (sic!) files for each package (by accident also in trunc; these are empty so far)
++ vignette:
+ * included svn-multi style files to /inst/doc folders for upload on CRAN
+
+##############
v 2.1
##############
Modified: branches/distr-2.2/pkg/distrDoc/man/0distrDoc-package.Rd
===================================================================
--- branches/distr-2.2/pkg/distrDoc/man/0distrDoc-package.Rd 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distrDoc/man/0distrDoc-package.Rd 2009-09-04 15:07:53 UTC (rev 575)
@@ -67,6 +67,12 @@
\pkg{startupmsg}-version 0.5 on.
}
+\section{Package versions}{
+Note: The first two numbers of package versions do not necessarily reflect
+ package-individual development, but rather are chosen for the
+ distrXXX family as a whole in order to ease updating "depends"
+ information.
+}
\keyword{package}
\keyword{utilities}
\keyword{documentation}
Modified: branches/distr-2.2/pkg/distrEllipse/DESCRIPTION
===================================================================
--- branches/distr-2.2/pkg/distrEllipse/DESCRIPTION 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distrEllipse/DESCRIPTION 2009-09-04 15:07:53 UTC (rev 575)
@@ -1,5 +1,5 @@
Package: distrEllipse
-Version: 0.2
+Version: 2.2
Date: 2009-09-04
Title: S4 classes for elliptically contoured distributions
Depends: R(>= 2.8.0), methods, graphics, mvtnorm, setRNG(>= 2006.2-1), distr(>= 2.2), distrEx(>= 2.2), distrSim(>= 2.2), startupmsg
Modified: branches/distr-2.2/pkg/distrEllipse/chm/00Index.html
===================================================================
--- branches/distr-2.2/pkg/distrEllipse/chm/00Index.html 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distrEllipse/chm/00Index.html 2009-09-04 15:07:53 UTC (rev 575)
@@ -10,7 +10,7 @@
<param name="keyword" value=".. contents">
</object>
-<h2>Help pages for package ‘distrEllipse’ version 0.2</h2>
+<h2>Help pages for package ‘distrEllipse’ version 2.2</h2>
<p align="center">
<a href="# "> </a>
@@ -95,6 +95,10 @@
<td>Spherical distribution class</td></tr>
<tr><td width="25%"><a href="SphericalDistribution-class.html">d.rd,SphericalDistribution-method</a></td>
<td>Spherical distribution class</td></tr>
+<tr><td width="25%"><a href="MvtDistribution-class.html">df,MVtDistribution-method</a></td>
+<td>MVt distribution class</td></tr>
+<tr><td width="25%"><a href="MvtParameter-class.html">df,MVtParameter-method</a></td>
+<td>Paramter of a multivariate t distribution</td></tr>
<tr><td width="25%"><a href="MultivarDistrList-class.html">dim,MultivarDistrList-method</a></td>
<td>List of multivariate distributions</td></tr>
<tr><td width="25%"><a href="MultivarMixingDistribution-class.html">dim,MultivarMixingDistribution-method</a></td>
@@ -167,6 +171,12 @@
<table width="100%">
<tr><td width="25%"><a href="distrEllipseMASK.html">MASKING</a></td>
<td>Masking of/by other functions in package "distrEllipse"</td></tr>
+<tr><td width="25%"><a href="MvnormParameter-class.html">mean</a></td>
+<td>Paramter of a multivariate normal distribution</td></tr>
+<tr><td width="25%"><a href="MvnormDistribution-class.html">mean,MVNormDistribution-method</a></td>
+<td>MVNorm distribution class</td></tr>
+<tr><td width="25%"><a href="MvnormParameter-class.html">mean,MVNormParameter-method</a></td>
+<td>Paramter of a multivariate normal distribution</td></tr>
<tr><td width="25%"><a href="MultivarMixingDistribution-class.html">mixCoeff</a></td>
<td>Class "MultivarMixingDistribution"</td></tr>
<tr><td width="25%"><a href="MultivarMixingDistribution-class.html">mixCoeff,MultivarMixingDistribution-method</a></td>
@@ -201,11 +211,31 @@
<td>Class "MultivarMixingDistribution"</td></tr>
<tr><td width="25%"><a href="MultivarDistrList-class.html">MVDistrList-class</a></td>
<td>List of multivariate distributions</td></tr>
+<tr><td width="25%"><a href="MvnormDistribution.html">MVNorm</a></td>
+<td>Generating function for MVNormDistribution-class</td></tr>
+<tr><td width="25%"><a href="MvnormDistribution.html">MVNormDistribution</a></td>
+<td>Generating function for MVNormDistribution-class</td></tr>
+<tr><td width="25%"><a href="MvnormDistribution-class.html">MVNormDistribution-class</a></td>
+<td>MVNorm distribution class</td></tr>
+<tr><td width="25%"><a href="MvnormParameter-class.html">MVNormParameter-class</a></td>
+<td>Paramter of a multivariate normal distribution</td></tr>
+<tr><td width="25%"><a href="MvtDistribution.html">MVt</a></td>
+<td>Generating function for MvtDistribution-class</td></tr>
+<tr><td width="25%"><a href="MvtDistribution.html">MVtDistribution</a></td>
+<td>Generating function for MvtDistribution-class</td></tr>
+<tr><td width="25%"><a href="MvtDistribution-class.html">MVtDistribution-class</a></td>
+<td>MVt distribution class</td></tr>
+<tr><td width="25%"><a href="MvtParameter-class.html">MVtParameter-class</a></td>
+<td>Paramter of a multivariate t distribution</td></tr>
</table>
<h2><a name="N">-- N --</a></h2>
<table width="100%">
+<tr><td width="25%"><a href="MvtDistribution-class.html">ncp,MVtDistribution-method</a></td>
+<td>MVt distribution class</td></tr>
+<tr><td width="25%"><a href="MvtParameter-class.html">ncp,MVtParameter-method</a></td>
+<td>Paramter of a multivariate t distribution</td></tr>
<tr><td width="25%"><a href="distrEllipseoptions.html">Nsim</a></td>
<td>functions to change the global variables of the package 'distrEllipse'</td></tr>
</table>
@@ -284,6 +314,16 @@
<td>Class "MultivarMixingDistribution"</td></tr>
<tr><td width="25%"><a href="SphericalDistribution-class.html">showobj,SphericalDistribution-method</a></td>
<td>Spherical distribution class</td></tr>
+<tr><td width="25%"><a href="MvnormParameter-class.html">sigma</a></td>
+<td>Paramter of a multivariate normal distribution</td></tr>
+<tr><td width="25%"><a href="MvnormDistribution-class.html">sigma,MVNormDistribution-method</a></td>
+<td>MVNorm distribution class</td></tr>
+<tr><td width="25%"><a href="MvnormParameter-class.html">sigma,MVNormParameter-method</a></td>
+<td>Paramter of a multivariate normal distribution</td></tr>
+<tr><td width="25%"><a href="MvtDistribution-class.html">sigma,MVtDistribution-method</a></td>
+<td>MVt distribution class</td></tr>
+<tr><td width="25%"><a href="MvtParameter-class.html">sigma,MVtParameter-method</a></td>
+<td>Paramter of a multivariate t distribution</td></tr>
<tr><td width="25%"><a href="SphericalDistribution.html">SphericalDistribution</a></td>
<td>Generating function for SphericalDistribution-class</td></tr>
<tr><td width="25%"><a href="SphericalDistribution-class.html">SphericalDistribution-class</a></td>
Modified: branches/distr-2.2/pkg/distrEllipse/chm/0distrEllipse-package.html
===================================================================
--- branches/distr-2.2/pkg/distrEllipse/chm/0distrEllipse-package.html 2009-09-04 10:56:04 UTC (rev 574)
+++ branches/distr-2.2/pkg/distrEllipse/chm/0distrEllipse-package.html 2009-09-04 15:07:53 UTC (rev 575)
@@ -1,10 +1,10 @@
<html><head><title>distrEllipse – S4 classes for elliptically contoured distributions</title>
-<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
+<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<link rel="stylesheet" type="text/css" href="Rchm.css">
-</head>
-<body>
+</head><body>
-<table width="100%"><tr><td>distrEllipse-package(distrEllipse)</td><td align="right">R Documentation</td></tr></table><object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
+<table width="100%"><tr><td>distrEllipse-package(distrEllipse)</td><td align="right">R Documentation</td></tr></table>
+<object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
<param name="keyword" value="R: distrEllipse-package">
<param name="keyword" value="R: distrEllipse">
<param name="keyword" value=" distrEllipse – S4 classes for elliptically contoured distributions">
@@ -25,31 +25,48 @@
<h3>Details</h3>
<p>
+
+</p>
<table summary="Rd table">
<tr>
- <td align="left">Package: </td> <td align="left"> distrEllipse</td>
+ <td align="left">
+Package: </td><td align="left"> distrEllipse </td>
</tr>
<tr>
- <td align="left"> Version: </td> <td align="left"> 0.1</td>
+ <td align="left">
+Version: </td><td align="left"> 0.2 </td>
</tr>
<tr>
- <td align="left"> Date: </td> <td align="left"> 2009-06-29</td>
+ <td align="left">
+Date: </td><td align="left"> 2009-09-04 </td>
</tr>
<tr>
- <td align="left"> Depends: </td> <td align="left"> R(>= 2.8.0), methods, graphics, mvtnorm, setRNG(>= 2006.2-1), distr(>= 2.2), distrEx(>= 2.2), distrSim(>= 2.2), startupmsg</td>
+ <td align="left">
+Depends: </td><td align="left"> R(>= 2.8.0), methods, graphics, mvtnorm, setRNG(>= 2006.2-1),
+distr(>= 2.2), distrEx(>= 2.2), distrSim(>= 2.2), startupmsg</td>
</tr>
<tr>
- <td align="left"> LazyLoad: </td> <td align="left"> yes</td>
+ <td align="left">
+LazyLoad: </td><td align="left"> yes </td>
</tr>
<tr>
- <td align="left"> License: </td> <td align="left"> LGPL-3</td>
+ <td align="left">
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
- <td align="left"> URL: </td> <td align="left"> http://distr.r-forge.r-project.org/</td>
+ <td align="left">
+URL: </td><td align="left"> http://distr.r-forge.r-project.org/</td>
</tr>
-</table>
+<tr>
+ <td align="left">
+</td>
+</tr>
+</table><p>
+</p>
+
+
<h3>Classes</h3>
<p>
@@ -71,8 +88,7 @@
|>"MultivarDistrList" [*/class union of "MVDistrList", "UnivarDistrList"]
|>|>"MVDistrList"
|>"UnivarDistrList" (from distr) [*]
-</pre>
-</p>
+</pre></p>
<h3>Methods</h3>
@@ -83,8 +99,7 @@
(for SphericalDistribution)
show-methods Methods for Function show
(for Simulation/Contsimulation)
-</pre>
-</p>
+</pre></p>
<h3>Functions</h3>
@@ -93,8 +108,7 @@
<pre>
distrEllipseoptions Functions to change the global variables of the
package 'distrEllipse'
-</pre>
-</p>
+</pre></p>
<h3>Slot accessors / -replacement functions</h3>
@@ -122,10 +136,20 @@
</p>
<p>
The same can be achieved by wrapping the <code>library</code> or <code>require</code> call into
-either <code><a onclick="findlink('startupmsg', 'suppressStartupMessages.html')" style="text-decoration: underline; color: blue; cursor: hand">suppressStartupMessages</a>()</code> or <code><a onclick="findlink('startupmsg', 'onlytypeStartupMessages.html')" style="text-decoration: underline; color: blue; cursor: hand">onlytypeStartupMessages</a>(.,atypes="version")</code>.
+either <code><a onclick="findlink('startupmsg', 'suppressStartupMessages.html')" style="text-decoration: underline; color: blue; cursor: hand">suppressStartupMessages</a>()</code> or <code><a onclick="findlink('startupmsg', 'onlytypeStartupMessages.html')" style="text-decoration: underline; color: blue; cursor: hand">onlytypeStartupMessages</a>(.,atypes="version")</code>.
</p>
+<h3>Package versions</h3>
+
+<p>
+Note: The first two numbers of package versions do not necessarily reflect
+package-individual development, but rather are chosen for the
+distrXXX family as a whole in order to ease updating "depends"
+information.
+</p>
+
+
<h3>Start-up-Banner</h3>
<p>
@@ -151,10 +175,9 @@
<h3>Note</h3>
-<p>
-Global options controlling the plots and summaries of Dataclass and Simulation/Contsimulation
-objects may be inspected / set by <code><a href="distrEllipseoptions.html">distrEllipseoptions</a>()</code>
-and <code><a href="distrEllipseoptions.html">getdistrEllipseOption</a>()</code>.
+<p>Global options controlling the plots and summaries of Dataclass and Simulation/Contsimulation
+objects may be inspected / set by <code>()</code>
+and <code>()</code>.
</p>
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/distr -r 575
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