[Depmix-commits] r622 - in pkg/depmix: . R
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Tue Feb 25 09:40:06 CET 2014
Author: ingmarvisser
Date: 2014-02-25 09:40:06 +0100 (Tue, 25 Feb 2014)
New Revision: 622
Modified:
pkg/depmix/DESCRIPTION
pkg/depmix/NAMESPACE
pkg/depmix/R/depmix.R
Log:
Changes to fulfill requirements in R 3.1.0
Modified: pkg/depmix/DESCRIPTION
===================================================================
--- pkg/depmix/DESCRIPTION 2014-02-20 12:23:36 UTC (rev 621)
+++ pkg/depmix/DESCRIPTION 2014-02-25 08:40:06 UTC (rev 622)
@@ -1,10 +1,10 @@
Package: depmix
Version: 0.9.11
-Date: 2014-02-19
+Date: 2014-02-20
Title: Dependent Mixture Models
Author: Ingmar Visser <i.visser at uva.nl>
Maintainer: Ingmar Visser <i.visser at uva.nl>
-Depends: R (>= 2.13.1), MASS
+Depends: R (>= 3.0.2), MASS
Suggests: Rdonlp2
Description: Fit (multigroup) mixtures of latent Markov models on mixed categorical and continuous (timeseries) data
License: GPL-3
\ No newline at end of file
Modified: pkg/depmix/NAMESPACE
===================================================================
--- pkg/depmix/NAMESPACE 2014-02-20 12:23:36 UTC (rev 621)
+++ pkg/depmix/NAMESPACE 2014-02-25 08:40:06 UTC (rev 622)
@@ -1,5 +1,7 @@
useDynLib(depmix)
+import(MASS)
+
export(dmm,mgdmm,fitdmm,mixdmm,loglike,oneliner,bootstrap,posterior,
generate,lca,ntimes,itemtypes,dname,replicates,ncov,inames,
nitems,ind,markovdata)
Modified: pkg/depmix/R/depmix.R
===================================================================
--- pkg/depmix/R/depmix.R 2014-02-20 12:23:36 UTC (rev 621)
+++ pkg/depmix/R/depmix.R 2014-02-25 08:40:06 UTC (rev 622)
@@ -14,6 +14,8 @@
# #
###################################
+if(getRversion() >= "2.15.1") utils::globalVariables(c("donlp2", "donlp2Control"))
+
fitdmm <- function(dat,dmm,printlevel=1,poster=TRUE,tdcov=0,ses=TRUE,method="optim",vfactor=15,der=1,iterlim=100,kmst=!dmm$st,kmrep=5,postst=FALSE) {
mod=dmm #keep copy of the original model
## create good starting values if not provdided
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