[Depmix-commits] r354 - in papers/jss: . V1
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Mon Feb 22 16:49:12 CET 2010
Author: ingmarvisser
Date: 2010-02-22 16:49:12 +0100 (Mon, 22 Feb 2010)
New Revision: 354
Added:
papers/jss/V1/
papers/jss/V1/all.bib
papers/jss/V1/article.tex
papers/jss/V1/depmixS4-jss.tex
papers/jss/V1/depmixS4.pdf
papers/jss/V1/ingmar.bib
Removed:
papers/jss/README
papers/jss/all.bib
papers/jss/depmixS4-jss.tex
papers/jss/ingmar.bib
papers/jss/jss.bst
papers/jss/jss.cls
papers/jss/jss.dbj
papers/jss/jss.drv
papers/jss/jss.dtx
papers/jss/jss.ins
papers/jss/jss.pdf
papers/jss/jsslogo.jpg
Modified:
papers/jss/article.tex
Log:
updated paper directory/article.tex
Deleted: papers/jss/README
===================================================================
--- papers/jss/README 2010-02-22 14:52:53 UTC (rev 353)
+++ papers/jss/README 2010-02-22 15:49:12 UTC (rev 354)
@@ -1,47 +0,0 @@
-***************************************************
-** jss: A Document Class for Publications in the **
-** Journal of Statistical Software **
-***************************************************
-
-This zip-archive contains the pdfLaTeX infrastructure
-for publications in the Journal of Statistical Software.
-The files
- - jss.cls (LaTeX2e class)
- - jss.bst (BibTeX style)
- - jsslogo.jpg (JPG logo)
-need to be included in your search path (local working
-directory, texmf or localtexmf tree).
-
-A manual how to use jss.cls is provided in
- - jss.pdf.
-
-Furthermore, there are templates for articles, code
-snippets, book reviews and software reviews available
-in
- - article.tex
- - codesnippet.tex
- - bookreview.tex
- - softwarereview.tex
-
-The final version of JSS papers should be prepared using
-JSS styles; the submission of the final version needs to
-include the full sources (.tex, .bib, and all graphics).
-A quick check for the most important aspects of the JSS
-style is given below; authors should make sure that all
-of them are addressed in the final version:
- - The manuscript can be compiled by pdfLaTeX.
- - \proglang, \pkg and \code has been used for highlighting
- throughout the paper (including references).
- - References are provided in a .bib BibTeX database
- and included in the text by \cite, \citep, \citet,
- etc.
- - Titles and headers are formatted as described in
- the JSS manual:
- - \title in title style,
- - \section etc. in sentence style,
- - all titles in the BibTeX file in title style.
- - Figures, tables and equations are marked with a \label
- and referred to by \ref, e.g., "Figure~\ref{...}".
- - Software packes are \cite{}d properly.
-For more details, see the manual jss.pdf, in particular
-the style checklist in Section 2.1.
Added: papers/jss/V1/all.bib
===================================================================
--- papers/jss/V1/all.bib (rev 0)
+++ papers/jss/V1/all.bib 2010-02-22 15:49:12 UTC (rev 354)
@@ -0,0 +1,4184 @@
+%% This BibTeX bibliography file was created using BibDesk.
+%% http://bibdesk.sourceforge.net/
+
+
+%% Created for Ingmar Visser at 2009-07-20 11:55:16 +0200
+
+
+%% Saved with string encoding Unicode (UTF-8)
+
+
+
+ at article{Leisch2004,
+ Author = {Friedrich Leisch},
+ Date-Added = {2009-07-14 15:43:03 +0200},
+ Date-Modified = {2009-07-14 15:44:26 +0200},
+ Journal = {Journal of Statistical Software},
+ Number = {8},
+ Pages = {1-18},
+ Title = {FlexMix: A general framework for finite mixture models and latent class regression in R},
+ Url = {http://www.jstatsoft.org/v11/i08/},
+ Volume = {11},
+ Year = {2004},
+ Bdsk-Url-1 = {http://www.jstatsoft.org/v11/i08/}}
+
+ at article{Titman2008,
+ Author = {Andrew C. Titman and Linda D. Sharples},
+ Date-Added = {2009-07-14 15:36:07 +0200},
+ Date-Modified = {2009-07-14 15:36:50 +0200},
+ Journal = {STATISTICS IN MEDICINE},
+ Pages = {2177--2195},
+ Title = {A general goodness-of-fit test for Markov and hidden Markov models},
+ Volume = {27},
+ Year = {2008}}
+
+ at manual{Stasinopoulos2009a,
+ Author = {Mikis Stasinopoulos and Bob Rigby},
+ Date-Modified = {2009-07-20 11:55:02 +0200},
+ Note = {R package version 2.0-0, with contributions from Calliope Akantziliotou.},
+ Title = {gamlss: Generalized Additive Models for Location Scale and Shape.},
+ Url = {http://CRAN.R-project.org/package=gamlss},
+ Year = {2009},
+ Bdsk-Url-1 = {http://CRAN.R-project.org/package=gamlss}}
+
+ at manual{Stasinopoulos2009b,
+ Author = {Mikis Stasinopoulos and Bob Rigby},
+ Date-Modified = {2009-07-20 11:55:13 +0200},
+ Note = {R package version 2.0-0, with contributions from Calliope Akantziliotou and Raydonal Ospina and Nicoletta Motpan.},
+ Title = {gamlss.dist: Extra distributions to be used for GAMLSS modelling.},
+ Url = {http://CRAN.R-project.org/package=gamlss.dist},
+ Year = {2009},
+ Bdsk-Url-1 = {http://CRAN.R-project.org/package=gamlss.dist}}
+
+ at article{Dannemann2007,
+ Author = {J. R. N. Dannemann and Hajo Holzmann},
+ Date-Added = {2009-07-14 15:12:03 +0200},
+ Date-Modified = {2009-07-14 15:13:35 +0200},
+ Journal = {Scandinavian Journal of Statistics},
+ Number = {2},
+ Pages = {309-321},
+ Title = {Likelihood Ratio Testing for Hidden Markov Models Under Non-standard Conditions},
+ Volume = {25},
+ Year = {2007},
+ Bdsk-File-1 = {YnBsaXN0MDDUAQIDBAUGCQpYJHZlcnNpb25UJHRvcFkkYXJjaGl2ZXJYJG9iamVjdHMSAAGGoNEHCFRyb290gAFfEA9OU0tleWVkQXJjaGl2ZXKoCwwXGBkdJCVVJG51bGzTDQ4PEBEUViRjbGFzc1dOUy5rZXlzWk5TLm9iamVjdHOAB6ISE4ACgAOiFRaABIAGWWFsaWFzRGF0YVxyZWxhdGl2ZVBhdGjSDRobHFdOUy5kYXRhgAVPEQHKAAAAAAHKAAIAAApIRCBVMDE2OTYzAAAAAAAAAAAAAAAAAAAAAADFQKHgSCsAAABeXUIRREFOTkVNQU5OMjAwNy5wZGYAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGmq58aCUIIAAAAAAAAAAAAGAAQAAAkgAAAAAAAAAAAAAAAAAAAACmxpdGVyYXR1cmUAEAAIAADFQJPQAAAAEQAIAADGgjRiAAAAAQAYAF5dQgBeXJIARSHjAByLEgAcd0gADoovAAIAUUhEIFUwMTY5NjM6VXNlcnM6aXZpc3NlcjE6RG9jdW1lbnRzOkRyb3Bib3g6ZGVwbWl4ZW46bGl0ZXJhdHVyZTpEQU5ORU1BTk4yMDA3LnBkZgAADgAkABEARABBAE4ATgBFAE0AQQBOAE4AMgAwADAANwAuAHAAZABmAA8AFgAKAEgARAAgAFUAMAAxADYAOQA2ADMAEgBGVXNlcnMvaXZpc3NlcjEvRG9jdW1lbnRzL0Ryb3Bib3gvZGVwbWl4ZW4vbGl0ZXJhdHVyZS9EQU5ORU1BTk4yMDA3LnBkZgATAAEvAAAVAAIAD///AADSHh8gIVgkY2xhc3Nlc1okY2xhc3NuYW1loyEiI11OU011dGFibGVEYXRhVk5TRGF0YVhOU09iamVjdF8QPy4uLy4uLy4uLy4uLy4uLy4uL0Ryb3Bib3gvZGVwbWl4ZW4vbGl0ZXJhdHVyZS9EQU5ORU1BTk4yMDA3LnBkZtIeHyYnoicjXE5TRGljdGlvbmFyeQAIABEAGgAfACkAMgA3ADoAPwBBAFMAXABiAGkAcAB4AIMAhQCIAIoAjACPAJEAkwCdAKoArwC3ALkChwKMApUCoAKkArICuQLCAwQDCQMMAAAAAAAAAgEAAAAAAAAAKAAAAAAAAAAAAAAAAAAAAxk=}}
+
+ at manual{Tamura2009,
+ Author = {Ryuichi Tamura},
+ Date-Added = {2009-07-14 14:42:10 +0200},
+ Date-Modified = {2009-07-14 14:43:00 +0200},
+ Note = {R package version 0.4},
+ Title = {Rdonlp2: an R extension library to use {Peter Spelluci's DONLP2} from {R}.},
+ Url = {http://arumat.net/Rdonlp2/},
+ Year = {2009},
+ Bdsk-Url-1 = {http://arumat.net/Rdonlp2/}}
+
+ at article{Chung2007,
+ Author = {Hwan Chung and Theodore Walls and Yousung Park},
+ Journal = {Psychometrika},
+ Month = {September},
+ Number = {3},
+ Pages = {413-435},
+ Title = {A Latent Transition Model With Logistic Regression},
+ Url = {http://ideas.repec.org/a/spr/psycho/v72y2007i3p413-435.html},
+ Volume = {72},
+ Year = 2007,
+ Bdsk-File-1 = {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}}
+
+ at book{Fruhwirth2006,
+ Author = {Sylvia Fr\"uhwirth-Schnatter},
+ Date-Added = {2009-07-13 15:37:41 +0200},
+ Date-Modified = {2009-07-13 15:44:18 +0200},
+ Publisher = {Springer},
+ Series = {Springer Series in Statistics},
+ Title = {Finite Mixture and Markov Switching Models},
+ Year = {2006}}
+
+ at book{Siegler1981,
+ Author = {Robert S. Siegler},
+ Date-Added = {2009-07-13 15:35:10 +0200},
+ Date-Modified = {2009-07-13 15:36:07 +0200},
+ Number = {46},
+ Publisher = {SRCD},
+ Series = {Monographs of the Society for Research in Child Development},
+ Title = {Developmental sequences within and between concepts},
+ Year = {1981}}
+
+ at article{Leroux1992,
+ Author = {B. G. Leroux and M. L. Puterman},
+ Journal = {Biometrics},
+ Pages = {545-548},
+ Title = {Maximum-Penalized-Likelihood Estimation for Independent and {M}arkov-Dependent Mixture Models},
+ Volume = {48},
+ Year = {1992}}
+
+ at manual{Rdonlp2,
+ Author = {Ryuichi Tamura(ry.tamura at gmail.com)},
+ Note = {R package version 0.4},
+ Title = {Rdonlp2: an R extension library to use Peter Spelluci's DONLP2 from R.},
+ Url = {http://arumat.net/Rdonlp2/},
+ Year = {2009},
+ Bdsk-Url-1 = {http://arumat.net/Rdonlp2/}}
+
+ at manual{R2009,
+ Address = {Vienna, Austria},
+ Author = {{R Development Core Team}},
+ Date-Added = {2009-07-13 15:08:45 +0200},
+ Date-Modified = {2009-07-13 15:45:14 +0200},
+ Note = {{ISBN} 3-900051-07-0},
+ Organization = {R Foundation for Statistical Computing},
+ Title = {R: A Language and Environment for Statistical Computing},
+ Url = {http://www.R-project.org},
+ Year = {2009},
+ Bdsk-Url-1 = {http://www.R-project.org}}
+
+ at manual{R2008,
+ Address = {Vienna, Austria},
+ Author = {{R Development Core Team}},
+ Date-Added = {2009-07-13 15:02:27 +0200},
+ Date-Modified = {2009-07-13 15:02:27 +0200},
+ Note = {{ISBN} 3-900051-07-0},
+ Organization = {R Foundation for Statistical Computing},
+ Title = {R: A Language and Environment for Statistical Computing},
+ Url = {http://www.R-project.org},
+ Year = {2008},
+ Bdsk-Url-1 = {http://www.R-project.org}}
+
+ at article{Ratcliff2003,
+ Author = {Roger Ratcliff and Anjali Thapar and Gail McKoon},
+ Date-Added = {2009-06-29 12:58:25 +0200},
+ Date-Modified = {2009-06-29 12:59:40 +0200},
+ Journal = {Perception & Psychophysics},
+ Number = {4},
+ Pages = {523-535},
+ Title = {A diffusion model analysis of the effects of aging on brightness discrimination},
+ Volume = {65},
+ Year = {2003},
+ Bdsk-File-1 = {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}}
+
+ at article{Jansen1997,
+ Author = {Brenda R. J. Jansen and Han L. J. {Van der Maas}},
+ Date-Added = {2009-06-29 12:23:16 +0200},
+ Date-Modified = {2009-06-29 12:24:23 +0200},
+ Journal = {Developmental Review},
+ Pages = {321-357},
+ Title = {Statistical test of the rule assessment methodology by latent class analysis},
+ Volume = {17},
+ Year = {1997}}
+
+ at article{Brown2008b,
+ Author = {Scott D. Brown and Andrew Heathcote},
+ Date-Added = {2009-06-29 12:08:39 +0200},
+ Date-Modified = {2009-06-29 12:10:00 +0200},
+ Journal = {Cognitive Psychology},
+ Pages = {153-178},
+ Title = {The simplest complete model of choice response time: Linear ballistic accumulation},
+ Volume = {57},
+ Year = {2008},
+ Bdsk-File-1 = {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}}
+
+ at article{Hamaker2007,
+ Author = {Ellen L. Hamaker and Conor V. Dolan and Peter C. M. Molenaar},
+ Date-Added = {2008-12-05 16:05:58 +0100},
+ Date-Modified = {2008-12-05 16:08:49 +0100},
+ Journal = {Journal of Research in Personality},
+ Pages = {295-315},
+ Title = {The integrated trait-state model},
+ Volume = {41},
+ Year = {2007}}
+
+ at article{Molenaar2005,
+ Author = {{Peter C. M.} Molenaar},
+ Date-Added = {2008-12-05 15:37:35 +0100},
+ Date-Modified = {2008-12-05 15:38:52 +0100},
+ Journal = {Measurement},
+ Pages = {201-218},
+ Title = {A manifesto on psychology as ideographic science: bringing the person back into scientific psychology, this time forever},
+ Volume = {2},
+ Year = {2005}}
+
+ at book{Venables2002,
+ Address = {New York},
+ Author = {W. N. Venables and B. D. Ripley},
+ Edition = {Fourth},
+ Note = {ISBN 0-387-95457-0},
+ Publisher = {Springer},
+ Title = {Modern Applied Statistics with S},
+ Url = {http://www.stats.ox.ac.uk/pub/MASS4},
+ Year = {2002},
+ Bdsk-Url-1 = {http://www.stats.ox.ac.uk/pub/MASS4}}
+
+ at book{Siegler2005,
+ Address = {Upper Saddle River (NJ)},
+ Author = {Robert S. Siegler and Martha Wagner Alibali},
+ Date-Added = {2008-12-05 13:03:01 +0100},
+ Date-Modified = {2008-12-05 13:04:47 +0100},
+ Publisher = {Prentice-Hall},
+ Title = {Children\'s Thinking},
+ Year = {2005}}
+
+ at book{Inhelder1958,
+ Address = {New York},
+ Author = {B. Inhelder and Jean Piaget},
+ Date-Added = {2008-12-05 13:00:59 +0100},
+ Date-Modified = {2008-12-05 13:02:30 +0100},
+ Publisher = {Basic Books},
+ Title = {The growth of logical thinking from childhood to adolescence},
+ Year = {1958}}
+
+ at phdthesis{Jansen2001,
+ Author = {Brenda R. J. Jansen},
+ Date-Added = {2008-12-05 12:50:10 +0100},
+ Date-Modified = {2008-12-05 13:43:51 +0100},
+ Keywords = {balance scale},
+ School = {University of Amsterdam, Department of Psychology},
+ Title = {Development of reasoning on the balance scale task: Psychometric assessment of cognitive strategies},
+ Year = 2001}
+
+ at article{Pylyshyn2003a,
+ Author = {Zenon W. Pylyshyn},
+ Date-Added = {2008-08-25 11:19:13 +0200},
+ Date-Modified = {2008-08-25 11:20:33 +0200},
+ Journal = {Trends in Cognitive Sciences},
+ Number = {3},
+ Pages = {111-112},
+ Title = {Explaining mental imagery: now you see it, now you don't},
+ Volume = {7},
+ Year = {2003},
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+
+ at article{Kosslyn2003,
+ Author = {Stephen M. Kosslyn and Giorgio Ganis and William L. Thompson},
+ Date-Added = {2008-08-25 11:14:39 +0200},
+ Date-Modified = {2008-08-25 11:16:07 +0200},
+ Journal = {Trends in Cognitive Sciences},
+ Keywords = {imagery},
+ Number = {3},
+ Pages = {109--111},
+ Title = {Mental imagery: against the nihilistic hypothesis},
+ Volume = {7},
+ Year = {2003},
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+
+ at article{Ratcliff1978,
+ Author = {Roger Ratcliff},
+ Date-Added = {2008-08-06 10:17:54 +0200},
+ Date-Modified = {2008-08-06 10:28:49 +0200},
+ Journal = {Psychological Review},
+ Pages = {59-108},
+ Title = {A theory of memory retrieval},
+ Volume = {85},
+ Year = {1978}}
+
+ at article{Reboussin1998,
+ Author = {Beth A. Reboussin and David M. Reboussin and Kun-Yee Liang and James C. Anthony},
+ Date-Added = {2008-08-06 10:05:02 +0200},
+ Date-Modified = {2008-08-06 10:06:18 +0200},
+ Journal = {Multivariate Behavioral Research},
+ Number = {4},
+ Pages = {457-478},
+ Title = {Latent Transition Modeling of Progression of Health-Risk Behavior},
+ Volume = {33},
+ Year = {1998}}
+
+ at article{Kaplan2008,
+ Author = {David Kaplan},
+ Date-Added = {2008-08-06 10:04:07 +0200},
+ Date-Modified = {2008-08-06 10:04:52 +0200},
+ Journal = {Developmental Psychology},
+ Number = {2},
+ Pages = {457-467},
+ Title = {An Overview of Markov Chain Methods for the Study of Stage-Sequential Developmental Processes},
+ Volume = {44},
+ Year = {2008},
+ Bdsk-File-1 = {YnBsaXN0MDDUAQIDBAUGCQpYJHZlcnNpb25UJHRvcFkkYXJjaGl2ZXJYJG9iamVjdHMSAAGGoNEHCFRyb290gAFfEA9OU0tleWVkQXJjaGl2ZXKoCwwXGBkdJCVVJG51bGzTDQ4PEBEUViRjbGFzc1dOUy5rZXlzWk5TLm9iamVjdHOAB6ISE4ACgAOiFRaABIAGWWFsaWFzRGF0YVxyZWxhdGl2ZVBhdGjSDRobHFdOUy5kYXRhgAVPEQIGAAAAAAIGAAIAAApIRCBVMDE2OTYzAAAAAAAAAAAAAAAAAAAAAADFQKHgSCsAAAAc+vAOS2FwbGFuMjAwOC5wZGYAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABz69cSFQcFQREYgQ0FSTwAFAAUAAAkgAAAAAAAAAAAAAAAAAAAACmxpdGVyYXR1cmUAEAAIAADFQJPQAAAAEQAIAADEhSWhAAAAAQAgABz68AAc+s0AHPnHABzfPwAcsRwAHIsSABx3SAAOii8AAgBuSEQgVTAxNjk2MzpVc2Vyczppdmlzc2VyMTpEb2N1bWVudHM6cHJvamVjdHM6fnByb2plY3RzRmluaXNoZWQ6SW5QcmVzczpkeW5jb25mZXJlbmNlOmxpdGVyYXR1cmU6S2FwbGFuMjAwOC5wZGYADgAeAA4ASwBhAHAAbABhAG4AMgAwADAAOAAuAHAAZABmAA8AFgAKAEgARAAgAFUAMAAxADYAOQA2ADMAEgBjVXNlcnMvaXZpc3NlcjEvRG9jdW1lbnRzL3Byb2plY3RzL35wcm9qZWN0c0ZpbmlzaGVkL0luUHJlc3MvZHluY29uZmVyZW5jZS9saXRlcmF0dXJlL0thcGxhbjIwMDgucGRmAAATAAEvAAAVAAIAD///AADSHh8gIVgkY2xhc3Nlc1okY2xhc3NuYW1loyEiI11OU011dGFibGVEYXRhVk5TRGF0YVhOU09iamVjdF8QUC4uLy4uLy4uLy4uLy4uL35wcm9qZWN0c0ZpbmlzaGVkL0luUHJlc3MvZHluY29uZmVyZW5jZS9saXRlcmF0dXJlL0thcGxhbjIwMDgucGRm0h4fJieiJyNcTlNEaWN0aW9uYXJ5AAgAEQAaAB8AKQAyADcAOgA/AEEAUwBcAGIAaQBwAHgAgwCFAIgAigCMAI8AkQCTAJ0AqgCvALcAuQLDAsgC0QLcAuAC7gL1Av4DUQNWA1kAAAAAAAACAQAAAAAAAAAoAAAAAAAAAAAAAAAAAAADZg==}}
+
+ at article{Collins1992,
+ Author = {Linda M. Collins and Stuart E. Wugalter},
+ Date-Added = {2008-08-06 10:03:08 +0200},
+ Date-Modified = {2008-08-06 10:04:00 +0200},
+ Journal = {Multivariate Behavioral Research},
+ Number = {1},
+ Pages = {131-157},
+ Title = {Latent Class Models for Stage-Sequential Dynamic Latent Variables},
+ Volume = {27},
+ Year = {1992}}
+
+ at article{Bureau2003,
+ Author = {Alexandre Bureau and Stephen Shiboski and James P. Hughes},
+ Date-Added = {2008-08-06 10:00:03 +0200},
+ Date-Modified = {2008-08-06 10:01:01 +0200},
+ Journal = {Statistics in Medicine},
+ Pages = {441-462},
+ Title = {Applications of continuous time hidden Markov models to the study of misclassi ed disease outcomes},
+ Volume = {22},
+ Year = {2003}}
+
+ at article{Bockenholt2005,
+ Author = {Ulf B\"{o}ckenholt},
+ Date-Added = {2008-08-06 09:58:19 +0200},
+ Date-Modified = {2008-08-06 09:59:59 +0200},
+ Journal = {Psychological Methods},
+ Number = {1},
+ Pages = {65-83},
+ Title = {A Latent Markov Model for the Analysis of Longitudinal Data Collected in Continuous Time: States, Durations, and Transitions},
+ Volume = {10},
+ Year = {2005}}
+
+ at article{Mackay2004,
+ Author = {Rachel Mackay Altman},
+ Date-Added = {2008-08-04 14:00:35 +0200},
+ Date-Modified = {2008-08-04 14:01:30 +0200},
+ Journal = {Biometrics},
+ Pages = {444-450},
+ Title = {Assessing the Goodness-of-Fit of Hidden Markov Models},
+ Volume = {60},
+ Year = {2004}}
+
+ at misc{wcwa,
+ Date-Added = {2008-08-04 11:38:03 +0200},
+ Date-Modified = {2008-08-04 11:42:51 +0200},
+ Howpublished = {http://www.watercorporation.com.au/},
+ Title = {Water Corporation of Western Australia},
+ Url = {http://www.watercorporation.com.au/},
+ Bdsk-Url-1 = {http://www.watercorporation.com.au/}}
+
+ at misc{Csiro,
+ Date-Added = {2008-08-04 11:35:18 +0200},
+ Date-Modified = {2008-08-04 11:43:03 +0200},
+ Howpublished = {http://www.cmar.csiro.au/},
+ Title = {Marine and Atmospheric Research},
+ Url = {http://www.cmar.csiro.au/},
+ Bdsk-Url-1 = {http://www.cmar.csiro.au/}}
+
+ at article{Eid2003,
+ Author = {Michael Eid and Rolf Langeheine},
+ Date-Added = {2008-08-04 11:32:46 +0200},
+ Date-Modified = {2008-08-04 11:34:22 +0200},
+ Journal = {Measurement: Interdisciplinary Research and Perspectives},
+ Number = {3},
+ Pages = {179-206},
+ Title = {Separating Stable From Variable Individuals In Longitudinal Studies by Mixture Distribution Models},
+ Volume = {1},
+ Year = {2003}}
+
+ at article{Maas1992,
+ Author = {Han L. J. {Van der Maas} and {Peter C. M.} Molenaar},
+ Date-Added = {2008-08-04 11:26:13 +0200},
+ Date-Modified = {2008-12-05 12:53:59 +0100},
+ Journal = {Psychological Review},
+ Pages = {395-417},
+ Title = {Stagewise Cognitive Development: An Application of Catastrophe Theory},
+ Volume = {99},
+ Year = {1992}}
+
+ at book{Fahrmeir2001,
+ Author = {Ludwig Fahrmeir and Gerhard Tutz and W. Hennevogl},
+ Date-Added = {2008-08-04 11:20:45 +0200},
+ Date-Modified = {2008-08-04 11:22:12 +0200},
+ Publisher = {Springer},
+ Title = {Multivariate Statistical Modelling Based on Generalized Linear Models},
+ Year = {2001}}
+
+ at article{Ashby2001,
+ Author = {F. Gregory Ashby and S. W. Ell},
+ Date-Added = {2008-08-04 11:16:40 +0200},
+ Date-Modified = {2008-08-04 11:18:10 +0200},
+ Journal = {TRENDS in Cognitive Sciences},
+ Pages = {204-210},
+ Title = {The neurobiology of human category learning},
+ Volume = {5},
+ Year = {2001}}
+
+ at book{Agresti2002,
+ Address = {Hoboken, NJ},
+ Author = {Alan Agresti},
+ Date-Added = {2008-08-04 11:08:21 +0200},
+ Date-Modified = {2008-08-04 11:10:13 +0200},
+ Edition = {2},
+ Publisher = {Wiley-Interscience},
+ Series = {Wiley series in probability and mathematical statistics},
+ Title = {Categorical Data Analysis},
+ Year = {2002}}
+
+ at article{erickson-66,
+ Author = {Erickson, James R. and Zajkowski, Myron, M. and Ehmann, Evan D.},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Journal = {Journal of Experimental Psychology},
+ Number = {5},
+ Pages = {690-697},
+ Title = {All-or-none assumptions in concept identification: Analysis of latency data},
+ Volume = {72},
+ Year = {1966}}
+
+ at article{erickson-67,
+ Author = {Erickson, James R. and Zajkowski, Myron, M.},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Journal = {Journal of Experimental Psychology},
+ Number = {2},
+ Pages = {212-218},
+ Title = {Learning several concept-identification problems concurrently: A test of the sampling-with-replacement assumption},
+ Volume = {74},
+ Year = {1967}}
+
+ at manual{LatentGold3-2003,
+ Address = {Belmont (MA), USA},
+ Author = {Jeroen K. Vermunt and Jay Magidson},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Publisher = {Statistical Innovations Inc.},
+ Title = {Latent Gold 3.0 [Computer program and User's Guide]},
+ Year = 2003}
+
+ at manual{mx-02,
+ Address = {VCU Box 900126, Richmond, VA 23298},
+ Author = {Neale, M. C. and Boker, S. M. and Xie, G. and Maes, H. H.},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Edition = {sixth},
+ Organization = {Department of Psychiatry},
+ Title = {Mx: Statistical modeling},
+ Year = 2003}
+
+ at manual{Panmark3-96,
+ Address = {Voorburg: The Netherlands},
+ Author = {Frank {Van de Pol} and Rolf Langeheine and W. De Jong},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Publisher = {Statistics Netherlands},
+ Title = {PANMARK 3. Panel analysis using {M}arkov chains. A latent class analysis program [User manual].},
+ Year = 1996}
+
+ at manual{R2004,
+ Address = {Vienna, Austria},
+ Author = {{R Development Core Team}},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Note = {{ISBN} 3-900051-07-0},
+ Organization = {R Foundation for Statistical Computing},
+ Title = {R: A language and environment for statistical computing},
+ Url = {http://www.R-project.org},
+ Year = {2004},
+ Bdsk-Url-1 = {http://www.R-project.org}}
+
+ at article{Visser2005,
+ Author = {Ingmar Visser},
+ Date-Added = {2008-08-04 11:04:43 +0200},
+ Date-Modified = {2008-08-04 11:04:43 +0200},
+ Journal = {Manuscript in preparation},
+ Title = {depmix: {A}n {R}-package for fitting mixtures of latent {M}arkov models on mixed data with covariates},
+ Year = 2005}
+
+ at manual{R2007,
+ Address = {Vienna, Austria},
+ Author = {{R Development Core Team}},
+ Date-Added = {2008-07-04 11:36:55 +0200},
+ Date-Modified = {2008-07-04 11:36:55 +0200},
+ Note = {{ISBN} 3-900051-07-0},
+ Organization = {R Foundation for Statistical Computing},
+ Title = {R: A Language and Environment for Statistical Computing},
+ Url = {http://www.R-project.org},
+ Year = {2007},
+ Bdsk-Url-1 = {http://www.R-project.org}}
+
+ at article{Poldrack2006,
+ Author = {Russell A. Poldrack},
+ Date-Added = {2008-05-19 13:10:39 +0200},
+ Date-Modified = {2008-05-19 13:12:35 +0200},
+ Journal = {TRENDS in Cognitive Sciences},
+ Number = {2},
+ Pages = {59--63},
+ Title = {Can cognitive processes be inferred from neuroimaging data?},
+ Volume = {10},
+ Year = {2006}}
+
+ at article{Henson2006,
+ Author = {Richard Henson},
+ Date-Added = {2008-05-19 13:07:13 +0200},
+ Date-Modified = {2008-05-19 13:08:42 +0200},
+ Journal = {TRENDS in Cognitive Sciences},
+ Number = {2},
+ Pages = {64--69},
+ Title = {Forward inference using functional neuroimaging: dissociations versus associations},
+ Volume = {10},
+ Year = {2006}}
+
+ at article{Kim1992,
+ Author = {Jaegwon Kim},
+ Date-Added = {2008-05-19 13:04:12 +0200},
+ Date-Modified = {2008-05-19 13:05:37 +0200},
+ Journal = {Philosophy and Phenomenological Research},
+ Number = {1},
+ Pages = {1--26},
+ Title = {Multiple Realization and the Metaphysics of Reduction},
+ Volume = {52},
+ Year = {1992}}
+
+ at article{Bouwmeester2007,
+ Author = {Samantha Bouwmeester and Jeroen K. Vermunt and Klaas Sijtsma},
+ Date-Added = {2008-04-24 15:13:31 +0200},
+ Date-Modified = {2008-04-24 15:15:17 +0200},
+ Journal = {Developmental Review},
+ Keywords = {latent class model; fuzzy trace theory},
+ Pages = {41--74},
+ Title = {Development and individual differences in transitive reasoning: A fuzzy trace theory approach},
+ Volume = {27},
+ Year = {2007}}
+
+ at article{LaFrance2003,
+ Author = {Marianne LaFrance and Marvin A. Hecht and Elizabeth Levy Paluck},
+ Date-Added = {2008-03-28 10:57:51 +0100},
+ Date-Modified = {2008-03-28 10:59:14 +0100},
+ Journal = {Psychological Bulletin},
+ Keywords = {meta-analysis; smiling},
+ Number = {2},
+ Pages = {305-334},
+ Title = {The Contingent Smile: A Meta-Analysis of Sex Differences in Smiling},
+ Volume = {129},
+ Year = {2003},
+ Bdsk-File-1 = {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}}
+
+ at article{Siegert2006,
+ Author = {Richard J. Siegert and Kathryn D. Taylor and Mark Weatherall and David A. Abernethy},
+ Date-Added = {2008-03-28 10:47:38 +0100},
+ Date-Modified = {2008-03-28 10:51:47 +0100},
+ Journal = {Neuropsychology},
+ Keywords = {implicit learning; meta-analysis; parkinson},
+ Number = {4},
+ Pages = {490-495},
+ Title = {Is Implicit Sequence Learning Impaired in Parkinson's Disease? A Meta-Analysis},
+ Volume = {20},
+ Year = {2006},
+ Bdsk-File-1 = {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}}
+
+ at book{Cappe2005,
+ Address = {New York},
+ Author = {Oliver Cappe and Eric Moulines and Tobias Ryden},
+ Date-Added = {2008-03-21 14:11:35 +0100},
+ Date-Modified = {2008-03-21 14:14:07 +0100},
+ Publisher = {Springer},
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/depmix -r 354
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