[Depmix-commits] r433 - in papers/jss: . V1

[noreply at r-forge.r-project.org]

Author: ingmarvisser
Date: 2010-08-04 16:26:44 +0200 (Wed, 04 Aug 2010)
New Revision: 433

Added:
   papers/jss/V1/review_1.pdf
   papers/jss/V1/review_2.txt
Modified:
   papers/jss/dpx4.sh
   papers/jss/dpx4Stangle.R
   papers/jss/dpx4Sweave.R
Log:
More final changes to jss paper

Added: papers/jss/V1/review_1.pdf
===================================================================
(Binary files differ)


Property changes on: papers/jss/V1/review_1.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: papers/jss/V1/review_2.txt
===================================================================
--- papers/jss/V1/review_2.txt	                        (rev 0)
+++ papers/jss/V1/review_2.txt	2010-08-04 14:26:44 UTC (rev 433)
@@ -0,0 +1,34 @@
+Review of 
+
+depmixS4 : An R-package for hidden Markov models
+by Ingmar Visser, Maarten Speekenbrink
+
+-------------------------------------------------------------------------
+
+This is a well-written paper reporting on a substantial package that will
+be of interest to researchers in many fields.  
+
+I installed the package from CRAN and noted the warning:
+Warning: ./man/depmix-internal.Rd:39: All text must be in a section
+
+The authors should consider fixing this.  
+
+Section 3: 
+
+Authors should show 
+
+library("depmixS4")
+data("speed") 
+
+likewise
+
+data("balance")
+
+since readers not familiar with R may not know how to load this data otherwise.
+
+It may be preferable to submit the paper as a Sweave file, but I leave it to 
+the authors whether they want to make this change.  In any case, if they could
+please submit a .R script containing all the code in the paper, that would be 
+helpful.  
+
+ 


Property changes on: papers/jss/V1/review_2.txt
___________________________________________________________________
Added: svn:eol-style
   + native

Modified: papers/jss/dpx4.sh
===================================================================
--- papers/jss/dpx4.sh	2010-08-04 14:20:31 UTC (rev 432)
+++ papers/jss/dpx4.sh	2010-08-04 14:26:44 UTC (rev 433)
@@ -9,15 +9,15 @@
 R --vanilla < dpx4Stangle.R ;
 
 
-pdflatex dpx4Rev.tex ;
+pdflatex depmixS4.tex ;
 
-bibtex dpx4Rev ;
+bibtex depmixS4 ;
 
-pdflatex dpx4Rev.tex ;
+pdflatex depmixS4.tex ;
 
-pdflatex dpx4Rev.tex ;
+pdflatex depmixS4.tex ;
 
-open dpx4Rev.pdf; 
+open depmixS4.pdf ;
 
 
 

Modified: papers/jss/dpx4Stangle.R
===================================================================
--- papers/jss/dpx4Stangle.R	2010-08-04 14:20:31 UTC (rev 432)
+++ papers/jss/dpx4Stangle.R	2010-08-04 14:26:44 UTC (rev 433)
@@ -1 +1 @@
-Stangle("dpx4Rev.Rnw")
\ No newline at end of file
+Stangle("depmixS4.Rnw")
\ No newline at end of file

Modified: papers/jss/dpx4Sweave.R
===================================================================
--- papers/jss/dpx4Sweave.R	2010-08-04 14:20:31 UTC (rev 432)
+++ papers/jss/dpx4Sweave.R	2010-08-04 14:26:44 UTC (rev 433)
@@ -1 +1 @@
-Sweave("dpx4Rev.Rnw")
\ No newline at end of file
+Sweave("depmixS4.Rnw")
\ No newline at end of file