[Depmix-commits] r295 - papers/jss

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Mon Jul 13 16:56:19 CEST 2009


Author: ingmarvisser
Date: 2009-07-13 16:56:19 +0200 (Mon, 13 Jul 2009)
New Revision: 295

Added:
   papers/jss/article.pdf
Modified:
   papers/jss/all.bib
   papers/jss/article.tex
   papers/jss/ingmar.bib
Log:
Updated refs in the jss paper (still have compile problems ...)

Modified: papers/jss/all.bib
===================================================================
--- papers/jss/all.bib	2009-07-13 12:38:18 UTC (rev 294)
+++ papers/jss/all.bib	2009-07-13 14:56:19 UTC (rev 295)
@@ -2,13 +2,72 @@
 %% http://bibdesk.sourceforge.net/
 
 
-%% Created for Ingmar Visser at 2009-06-29 12:59:40 +0200 
+%% Created for Ingmar Visser at 2009-07-13 16:16:31 +0200 
 
 
 %% Saved with string encoding Unicode (UTF-8) 
 
 
 
+ at book{Fruhwirth2006,
+	Author = {Sylvia Fr\"uhwirth-Schnatter},
+	Date-Added = {2009-07-13 15:37:41 +0200},
+	Date-Modified = {2009-07-13 15:44:18 +0200},
+	Publisher = {Springer},
+	Series = {Springer Series in Statistics},
+	Title = {Finite Mixture and Markov Switching Models},
+	Year = {2006}}
+
+ at book{Siegler1981,
+	Author = {Robert S. Siegler},
+	Date-Added = {2009-07-13 15:35:10 +0200},
+	Date-Modified = {2009-07-13 15:36:07 +0200},
+	Number = {46},
+	Publisher = {SRCD},
+	Series = {Monographs of the Society for Research in Child Development},
+	Title = {Developmental sequences within and between concepts},
+	Year = {1981}}
+
+ at article{Leroux1992,
+	Author = {B. G. Leroux and M. L. Puterman},
+	Journal = {Biometrics},
+	Pages = {545-548},
+	Title = {Maximum-Penalized-Likelihood Estimation for Independent and {M}arkov-Dependent Mixture Models},
+	Volume = {48},
+	Year = {1992}}
+
+ at manual{Rdonlp2,
+	Author = {Ryuichi Tamura(ry.tamura at gmail.com)},
+	Note = {R package version 0.4},
+	Title = {Rdonlp2: an R extension library to use Peter Spelluci's DONLP2 from R.},
+	Url = {http://arumat.net/Rdonlp2/},
+	Year = {2009},
+	Bdsk-Url-1 = {http://arumat.net/Rdonlp2/}}
+
+ at manual{R2009,
+	Address = {Vienna, Austria},
+	Author = {{R Development Core Team}},
+	Date-Added = {2009-07-13 15:08:45 +0200},
+	Date-Modified = {2009-07-13 15:45:14 +0200},
+	Note = {{ISBN} 3-900051-07-0},
+	Organization = {R Foundation for Statistical Computing},
+	Title = {R: A Language and Environment for Statistical Computing},
+	Url = {http://www.R-project.org},
+	Year = {2009},
+	Bdsk-Url-1 = {http://www.R-project.org}}
+
+ at manual{R2008,
+	Address = {Vienna, Austria},
+	Author = {{R Development Core Team}},
+	Date-Added = {2009-07-13 15:02:27 +0200},
+	Date-Modified = {2009-07-13 15:02:27 +0200},
+	Note = {{ISBN} 3-900051-07-0},
+	Organization = {R Foundation for Statistical Computing},
+	Title = {R: A Language and Environment for Statistical Computing},
+	Url = {http://www.R-project.org},
+	Year = {2008},
+	Bdsk-Url-1 = {http://www.R-project.org}}
+
 @article{Ratcliff2003,
 	Author = {Roger Ratcliff and Anjali Thapar and Gail McKoon},
 	Date-Added = {2009-06-29 12:58:25 +0200},
@@ -19,7 +78,7 @@
 	Title = {A diffusion model analysis of the effects of aging on brightness discrimination},
 	Volume = {65},
 	Year = {2003},
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 @article{Jansen1997,
 	Author = {Brenda R. J. Jansen and Han L. J. {Van der Maas}},
@@ -40,7 +99,7 @@
 	Title = {The simplest complete model of choice response time: Linear ballistic accumulation},
 	Volume = {57},
 	Year = {2008},
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 @article{Hamaker2007,
 	Author = {Ellen L. Hamaker and Conor V. Dolan and Peter C. M. Molenaar},
@@ -110,7 +169,7 @@
 	Title = {Explaining mental imagery: now you see it, now you don't},
 	Volume = {7},
 	Year = {2003},
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 @article{Kosslyn2003,
 	Author = {Stephen M. Kosslyn and Giorgio Ganis and William L. Thompson},
@@ -123,7 +182,7 @@
 	Title = {Mental imagery: against the nihilistic hypothesis},
 	Volume = {7},
 	Year = {2003},
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 @article{Ratcliff1978,
 	Author = {Roger Ratcliff},
@@ -276,15 +335,6 @@
 	Title = {Categorical Data Analysis},
 	Year = {2002}}
 
- at book{Bijleveld1998,
-	Address = {London, Thousand Oaks, New Delhi},
-	Author = {Catrien C. J. Bijleveld and Leo J. Th. van der Kamp and  Ab Mooijaart and Willem A. van der Kloot and Rien van   der Leeden and Eeke van der Burg},
-	Date-Added = {2008-08-04 11:04:43 +0200},
-	Date-Modified = {2008-08-04 11:04:43 +0200},
-	Publisher = {Sage},
-	Title = {Longitudinal Data Analysis},
-	Year = 1998}
-
 @article{erickson-66,
 	Author = {Erickson, James R. and Zajkowski, Myron, M. and Ehmann, Evan D.},
 	Date-Added = {2008-08-04 11:04:43 +0200},
@@ -307,27 +357,6 @@
 	Volume = {74},
 	Year = {1967}}
 
- at article{Ghysels1994,
-	Author = {Eric Ghysels},
-	Date-Added = {2008-08-04 11:04:43 +0200},
-	Date-Modified = {2008-08-04 11:04:43 +0200},
-	Journal = {Journal of Business and Economic Statistics},
-	Number = 3,
-	Pages = {289--298},
-	Title = {On the Periodic Structure of the Business Cycle},
-	Volume = {12},
-	Year = 1994}
-
- at article{Katsikopoulos2001,
-	Author = {Konstantinos V. Katsikopoulos and Donald L. Fisher},
-	Date-Added = {2008-08-04 11:04:43 +0200},
-	Date-Modified = {2008-08-04 11:04:43 +0200},
-	Journal = {Journal of Mathemathical Psychology},
-	Pages = {324--333},
-	Title = {Formal Requirements of {M}arkov State Models for   Paired Associate Learning},
-	Volume = 45,
-	Year = 2001}
-
 @manual{LatentGold3-2003,
 	Address = {Belmont (MA), USA},
 	Author = {Jeroen K. Vermunt and Jay Magidson},
@@ -353,7 +382,7 @@
 	Date-Added = {2008-08-04 11:04:43 +0200},
 	Date-Modified = {2008-08-04 11:04:43 +0200},
 	Publisher = {Statistics Netherlands},
-	Title = {PANMARK 3. Panel analysis using {M}arkov chains.   A latent class analysis program [User manual].},
+	Title = {PANMARK 3. Panel analysis using {M}arkov chains. A latent class analysis program [User manual].},
 	Year = 1996}
 
 @manual{R2004,
@@ -368,32 +397,12 @@
 	Year = {2004},
 	Bdsk-Url-1 = {http://www.R-project.org}}
 
- at article{Schmittmann2005,
-	Author = {Schmittmann, Verena D. and Dolan, Conor V. and {van der Maas}, Han L. J. and Neale, Michael C.},
-	Date-Added = {2008-08-04 11:04:43 +0200},
-	Date-Modified = {2008-08-04 11:04:43 +0200},
-	Journal = {Multivariate Behavioral Research},
-	Note = {Accepted for publication},
-	Title = {Discrete latent {M}arkov models for normally distributed response data},
-	Year = 2005}
-
- at article{Vermunt1999,
-	Author = {Jeroen K. Vermunt and Rolf Langeheine and Ulf B\"{o}ckenholt},
-	Date-Added = {2008-08-04 11:04:43 +0200},
-	Date-Modified = {2008-08-04 11:04:43 +0200},
-	Journal = {Journal of Educational and Behavioral Statistics},
-	Number = 2,
-	Pages = {179--207},
-	Title = {Discrete-time discrete-state latent {M}arkov modles with  time-constant and time-varying covariates},
-	Volume = {24},
-	Year = 1999}
-
 @article{Visser2005,
 	Author = {Ingmar Visser},
 	Date-Added = {2008-08-04 11:04:43 +0200},
 	Date-Modified = {2008-08-04 11:04:43 +0200},
 	Journal = {Manuscript in preparation},
-	Title = {depmix: {A}n {R}-package for fitting mixtures of   latent {M}arkov models on mixed data with covariates},
+	Title = {depmix: {A}n {R}-package for fitting mixtures of latent {M}arkov models on mixed data with covariates},
 	Year = 2005}
 
 @manual{R2007,
@@ -463,7 +472,7 @@
 	Title = {The Contingent Smile: A Meta-Analysis of Sex Differences in Smiling},
 	Volume = {129},
 	Year = {2003},
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 @article{Siegert2006,
 	Author = {Richard J. Siegert and Kathryn D. Taylor and Mark Weatherall and David A. Abernethy},
@@ -476,7 +485,7 @@
 	Title = {Is Implicit Sequence Learning Impaired in Parkinson's Disease? A Meta-Analysis},
 	Volume = {20},
 	Year = {2006},
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 @book{Cappe2005,
 	Address = {New York},
@@ -499,7 +508,7 @@
 	Title = {Psychometric Intelligence Dissociates Implicit and Explicit Learning},
 	Volume = {33},
 	Year = {2007},
-	Bdsk-File-1 = {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}}
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 @article{Grun2007,
 	Author = {Bettina Gr{\"u}n and Friedrich Leisch},
@@ -2422,9 +2431,10 @@
 
 @article{Jansen2001b,
 	Author = {Brenda R. J. Jansen and Han L. J. {Van der Maas}},
-	Date-Modified = {2008-12-05 12:53:11 +0100},
+	Date-Modified = {2009-07-13 15:53:28 +0200},
 	Journal = {Developmental Review},
 	Keywords = {balance scale},
+	Number = {4},
 	Pages = {450-494},
 	Title = {Evidence for the Phase Transition from Rule I to Rule II on the Balance Scale Task},
 	Volume = {21},
@@ -2432,11 +2442,14 @@
 
 @article{Jansen2002,
 	Author = {Brenda R. J. Jansen and Han L. J. van der Maas},
-	Date-Modified = {2008-11-28 11:17:03 +0100},
+	Date-Modified = {2009-07-13 15:53:12 +0200},
 	Journal = {Journal of Experimental Child Psychology},
 	Keywords = {balance scale},
+	Number = {4},
+	Pages = {383-416},
 	Title = {The development of children's rule use on the balance scale task},
-	Year = {In press}}
+	Volume = {81},
+	Year = {2002}}
 
 @article{Jimenez1996,
 	Author = {Luis Jim\'{e}nez and Castor M\'{e}ndez and Axel Cleeremans},
@@ -3113,7 +3126,7 @@
 	Title = {Implicit learning shapes new conscious percepts and representations},
 	Volume = {4},
 	Year = 1997,
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 @incollection{Perruchet1998,
 	Author = {Pierre Perruchet and Annie Vinter},
@@ -3123,7 +3136,7 @@
 	Summary = {Similar to \citet{Per97}: it is contended that subjects' conscious perception is shaped by implicit learning. The reproduction of certain sequences or n-grams facilitates the perception of those n-grams. This theory runs counter to traditional explananations in terms of implicit or explicit knowledge of n-grams. Perception is shaped by familiarity with the n-grams rather than that knowledge is available to consciousness.},
 	Title = {Learning and development: The implicit knowledge assumption reconsidered},
 	Year = 1998,
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 @article{Perruchet2006,
 	Author = {Pierre Perruchet and Sebastien Pacton},
@@ -3208,17 +3221,6 @@
 	Title = {Connectionism and psychology: a psychological perspective on new connectionist research},
 	Year = 1991}
 
- at manual{R2008,
-	Address = {Vienna, Austria},
-	Author = {{R Development Core Team}},
-	Date-Modified = {2008-07-04 11:37:05 +0200},
-	Note = {{ISBN} 3-900051-07-0},
-	Organization = {R Foundation for Statistical Computing},
-	Title = {R: A Language and Environment for Statistical Computing},
[TRUNCATED]

To get the complete diff run:
    svnlook diff /svnroot/depmix -r 295


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