[datatable-help] Memory leak bug reports

Steve Lianoglou mailinglist.honeypot at gmail.com
Tue Sep 25 20:16:51 CEST 2012


Hi,

A (short) stab at the dark:

I know you do some fancy mojo in C land (over allocate and some self
ref stuff) -- I wonder if you need to explicitly delete the extra
stuff via some RegisterCFinalizer cleanup-voodoo in C land as well,
which is triggered when the R object is `rm`d.

Maybe?
-steve

On Tue, Sep 25, 2012 at 11:52 AM, Matthew Dowle <mdowle at mdowle.plus.com> wrote:
>
> Dear datatablers,
>
> We have 2 similar independently reported bug reports :
>
> https://r-forge.r-project.org/tracker/index.php?func=detail&aid=2191&group_id=240&atid=975
>
> https://r-forge.r-project.org/tracker/index.php?func=detail&aid=2284&group_id=240&atid=975
>
> I've already spent quite a bit of time on the first one (see history on
> #2191) but couldn't get to the crux of it. For me, I could see memory
> slowly growing, but not fast enough to cause a problem on my machine.  The
> second one is newly reported.
>
> Has anyone else seen this?
> Can anyone else reproduce?
> Does anyone have an inkling what it might be?
>
> I haven't tried the second one yet (#2284). Thought I'd ask onlist first.
>
> Thanks!
> Matthew
>
>
>
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-- 
Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact


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