[datatable-help] Basic join question
Matthew Dowle
mdowle at mdowle.plus.com
Thu Aug 18 10:15:34 CEST 2011
On the previous post, the lack of example data makes it more time
consuming to help. Please provide a way to generate an example dt.
Answers to 2nd two questions inline below ...
On Wed, 2011-08-17 at 18:27 -0700, Yang Zhang wrote:
> The docs say:
>
> "When i is a data.table, x must have a key. i is joined to x using the
> key and the rows in x that match are returned. An equi-join is
> performed between each column in i to each column in x's key. The
> match is a binary search in compiled C in O(log n) time. If i has less
> columns than x's key then many rows of x may match to each row of i.
> If i has more columns than x's key, the columns of i not involved in
> the join are included in the result. If i also has a key, it is i's
> key columns that are used to match to x's key columns and a binary
> merge of the two tables is carried out."
>
> Some additional quick questions:
>
> 1. *Which* columns of i are used in the join (assuming no keys are
> set)? Is it just left-to-right?
Yes, when i has no key, it's left-to-right.
> 2. When there are two columns with the same name in x and i (which
> aren't being used as join keys), is just the one from x kept?
Yes, good question. There is a feature request to provide a "x." and
"i." prefix to cope better with this situation; e.g.,
DT[X,age:=i.date-x.date,roll=TRUE]
>
>
> On Wed, Aug 17, 2011 at 6:26 PM, Yang Zhang <yanghatespam at gmail.com> wrote:
> > I'm going to continue here since the question is a bit more
> > complicated and SO isn't the best forum for back-and-forth.
> >
> > If I'm trying to do a join where I'm trying to aggregate counts
> > (including 0s for nomatches), is there something more concise than the
> > following, which is what I'm currently using since it works?
> >
> > # assume dt is a data.frame(user_id=..., age=...)
> > y = dt[, list(count=length(age)), by=user_id]
> > key(y) = 'user_id'
> > y = y[J(unique(x$user_id))]
> > y$count[is.na(y$count)] = 0
> >
> > I tried:
> >
> >> key(y) = 'user_id'
> >> y = y[J(unique(x$user_id)), list(count=length(age))]
> >> summary(y$count)
> > Min. 1st Qu. Median Mean 3rd Qu. Max.
> > 1.00 1.00 1.00 75.55 5.00 127200.00
> >> dim(y)
> > [1] 7655 2
> >
> > which gives me the right number of output rows but none of the lengths
> > are 0, presumably because length(NA) == 1. (There are definitely users
> > in x that are not in y.)
> >
> > But then when I tried (and there are no NAs in y$age):
> >
> >> count = function(x) if (any(is.na(x))) integer(0) else length(x)
> >> key(y) = 'user_id'
> >> y = y[J(unique(x$user_id)), list(count=count(age))]
> >> summary(y$count)
> > Min. 1st Qu. Median Mean 3rd Qu. Max.
> > 1.0 2.0 6.0 160.4 21.0 127200.0
> >> dim(y)
> > [1] 3581 2
> >
> > Rows seem to be disappearing, and still the min is 1.
> >
> > At this point I'm pretty disoriented. Any explanation? Thanks in advance.
> >
> >
> > On Wed, Aug 17, 2011 at 12:34 PM, Yang Zhang <yanghatespam at gmail.com> wrote:
> >> Thanks, edited the question.
> >>
> >> On Wed, Aug 17, 2011 at 3:53 AM, Matthew Dowle <mdowle at mdowle.plus.com> wrote:
> >>> Yang,
> >>> Since you also asked on SO, suggest we answer there (after your edit please)
> >>> :
> >>> http://stackoverflow.com/questions/7090621/how-to-do-a-basic-left-outer-join-with-data-table-in-r
> >>> Matthew
> >>>
> >>>
> >>> "Yang Zhang" <yanghatespam at gmail.com> wrote in message
> >>> news:CAKxBDU_o3i_+xujsCa0CmukDizctx6fnzbidOYZW9Co9w9iTvw at mail.gmail.com...
> >>>> How do I do the equivalent to the following?
> >>>>
> >>>> with dt as (select 1 as a, 0 as b union select 1, 0 union select 2, 0
> >>>> union select 2, 1 union select 3, 1 union select 3, 1),
> >>>> above as (select a, b from dt where b > .5),
> >>>> below as (select a, b from dt where b < .5)
> >>>> select above.a, count(below.a) from above left outer join below on
> >>>> (above.a = below.a) group by above.a;
> >>>> a | count
> >>>> ---+-------
> >>>> 3 | 0
> >>>> 2 | 1
> >>>> (2 rows)
> >>>>
> >>>> How do I accomplish the same thing with data.tables? This is what I
> >>>> have so far:
> >>>>
> >>>> DT = data.table(a=as.integer(c(1,1,2,2,3,3)), b=c(0,0,0,1,1,1))
> >>>> above = DT[DT$b > .5]
> >>>> below = DT[DT$b < .5, list(a=a)]
> >>>> key(below) = 'a'
> >>>> below[above, list(count=length(a)), by=a]
> >>>>
> >>>> but this gives me:
> >>>>
> >>>> a count
> >>>> [1,] 2 1
> >>>> [2,] NA 1
> >>>>
> >>>> Thanks in advance for any tips.
> >>>>
> >>>> --
> >>>> Yang Zhang
> >>>> http://yz.mit.edu/
> >>>
> >>>
> >>>
> >>> _______________________________________________
> >>> datatable-help mailing list
> >>> datatable-help at lists.r-forge.r-project.org
> >>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help
> >>>
> >>
> >>
> >>
> >> --
> >> Yang Zhang
> >> http://yz.mit.edu/
> >>
> >
> >
> >
> > --
> > Yang Zhang
> > http://yz.mit.edu/
> >
>
>
>
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