[datatable-help] Is the (re-)sorting of a data.table by setting itskey stable?
Short, Tom
TShort at epri.com
Mon May 3 02:42:32 CEST 2010
Hello Steve,
It's by design. The sorting/grouping that is done when you set a key is
done internally using either the function "order" or "sort.list" with
the radix option. Both are "stable", meaning that the order of the other
columns is maintained.
- Tom
-----Original Message-----
From: datatable-help-bounces at lists.r-forge.r-project.org
[mailto:datatable-help-bounces at lists.r-forge.r-project.org] On Behalf Of
Steve Lianoglou
Sent: Sunday, May 02, 2010 8:35 PM
To: datatable-help at lists.r-forge.r-project.org
Subject: [datatable-help] Is the (re-)sorting of a data.table by setting
itskey stable?
Hi all,
Firstly, thanks for fixing the bug regarding the non-resorting of a
data.table when it was transformed from a pre-existing data.table. I
just checked out the latest code from SVN and it seems to work as
expected.
Now on to the question:
Say I have a data.frame `gene.annos` like so:
symbol exon.start exon.width exon.anno
WASH5P 4225 468 utr
WASH5P 4833 69 utr
WASH5P 5659 152 utr
LOC100288778 4225 468 utr
LOC100288778 4833 69 utr
LOC100288778 5659 152 utr
FAM138F 24475 563 utr
FAM138F 25140 205 utr
FAM138F 25584 361 utr
Now say I create a new data.table from the data.frame, and set the
data.table's key to "symbol".
Is it guaranteed for the rows in each "subgroup" be moved around in
the same order as they appeared originally?
For instance, if I did that on this data.table, the information for
"FAM13AF" would be pushed to the top, but would the 1st, 2nd, and 3rd
rows for FAM13AF in the new data.table be the same 1st, 2nd, and 3rd
rows for FAM13AF in the original data.frame?
It looks like it's keeping them in order, but I just wanted to be sure
that this behavior is a guarantee by design, and not a happy
coincidence for now.
Thanks,
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact
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