[CHNOSZ-commits] r672 - in pkg/CHNOSZ: . vignettes

[noreply at r-forge.r-project.org]

Author: jedick
Date: 2021-04-09 05:48:37 +0200 (Fri, 09 Apr 2021)
New Revision: 672

Modified:
   pkg/CHNOSZ/DESCRIPTION
   pkg/CHNOSZ/vignettes/OBIGT.bib
   pkg/CHNOSZ/vignettes/eos-regress.Rmd
Log:
Submit version 1.4.1 to CRAN


Modified: pkg/CHNOSZ/DESCRIPTION
===================================================================
--- pkg/CHNOSZ/DESCRIPTION	2021-04-08 02:22:32 UTC (rev 671)
+++ pkg/CHNOSZ/DESCRIPTION	2021-04-09 03:48:37 UTC (rev 672)
@@ -1,6 +1,6 @@
 Date: 2021-04-08
 Package: CHNOSZ
-Version: 1.4.0-41
+Version: 1.4.1
 Title: Thermodynamic Calculations and Diagrams for Geochemistry
 Authors at R: c(
     person("Jeffrey", "Dick", , "j3ffdick at gmail.com", role = c("aut", "cre"),

Modified: pkg/CHNOSZ/vignettes/OBIGT.bib
===================================================================
--- pkg/CHNOSZ/vignettes/OBIGT.bib	2021-04-08 02:22:32 UTC (rev 671)
+++ pkg/CHNOSZ/vignettes/OBIGT.bib	2021-04-09 03:48:37 UTC (rev 672)
@@ -991,7 +991,6 @@
   number    = {5-6},
   pages     = {607--611},
   volume    = {78},
-  url       = {http://ammin.geoscienceworld.org/content/78/5-6/607},
 }
 
 @Misc{SLOP07,
@@ -1018,7 +1017,6 @@
   number    = {1},
   pages     = {221--253},
   volume    = {38},
-  url       = {http://rimg.geoscienceworld.org/content/38/1/221},
 }
 
 @Article{LCT17,
@@ -1091,7 +1089,6 @@
   number    = {3-4},
   pages     = {328--344},
   volume    = {75},
-  url       = {http://ammin.geoscienceworld.org/content/75/3-4/328},
 }
 
 @Article{SHD91,

Modified: pkg/CHNOSZ/vignettes/eos-regress.Rmd
===================================================================
--- pkg/CHNOSZ/vignettes/eos-regress.Rmd	2021-04-08 02:22:32 UTC (rev 671)
+++ pkg/CHNOSZ/vignettes/eos-regress.Rmd	2021-04-09 03:48:37 UTC (rev 672)
@@ -445,7 +445,7 @@
 For example, the almost 200 cal/mol offset in Δ<i>G</i>° at 350 °C corresponds to a difference in log<i>K</i> of only -0.07.
 
 The following example uses the `H4SiO4` from Stefánsson (2001) to make an activity diagram for the K<sub>2</sub>O-Al<sub>2</sub>O<sub>3</sub>-SiO<sub>2</sub>-H<sub>2</sub>O system.
-This is similar to diagrams found, for example, on p. 361 of [Garrels and Christ, 1965](https://www.worldcat.org/oclc/517586) and Figure 3 of [Steinmann et al., 1994](http://ccm.geoscienceworld.org/content/42/2/197), but is quantitatively a closer match to the diagram in the [User's Guide to PHREEQC](https://wwwbrr.cr.usgs.gov/projects/GWC_coupled/phreeqc/html/final-75.html).
+This is similar to the diagram on p. 361 of [Garrels and Christ, 1965](https://www.worldcat.org/oclc/517586), but is quantitatively a closer match to the diagram in the [User's Guide to PHREEQC](https://wwwbrr.cr.usgs.gov/projects/GWC_coupled/phreeqc/html/final-75.html).
 
 ```{r activity_diagram, fig.margin=TRUE, fig.width=4, fig.height=4, small.mar=TRUE, echo=TRUE, results="hide", message=FALSE, dpi=dpi, out.width="100%", cache=TRUE, fig.cap="Activity diagram for K<sub>2</sub>O-Al<sub>2</sub>O<sub>3</sub>-SiO<sub>2</sub>-H<sub>2</sub>O.", pngquant=pngquant}
 basis(c("Al+3", "H4SiO4", "K+", "H2O", "H+", "O2"))